RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 PRR25Q96S07 402 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 FGF20Q9NP95 211 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-204ENST00000376491 ZMAT5Q9UDW3 170 aaKnown RBP11.69□□□□□ -0.54
CLCN6-204ENST00000376491 RPL36Q9Y3U8 105 aaKnown RBP11.69□□□□□ -0.54
CLCN6-204ENST00000376491 SORL1Q92673 2214 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 LOC100130705A0A1B0GUX0 176 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 MAGEA13PA6NCF6 341 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 WBP4O75554 376 aaKnown RBP11.68□□□□□ -0.54
CLCN6-204ENST00000376491 MOSP00540 346 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 IGFBP3P17936 291 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-204ENST00000376491 BDKRB2P30411 391 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 ETV1P50549 477 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF137PP52743 207 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 GP2P55259 537 aaKnown RBP11.68□□□□□ -0.54
CLCN6-204ENST00000376491 SMN1Q16637 294 aaKnown RBP11.68□□□□□ -0.54
CLCN6-204ENST00000376491 SLC22A6Q4U2R8 563 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 CCDC58Q4VC31 144 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 ZFP1Q6P2D0 407 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 LINC00596Q86U02 117 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 FAM71E2Q8N5Q1 922 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 OR8U1Q8NH10 309 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 CYYR1Q96J86 154 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 GON7Q9BXV9 100 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 SCOCQ9UIL1 159 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 U3KQK5 164 aa11.68□□□□□ -0.54
CLCN6-204ENST00000376491 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 AIPO00170 330 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 OGG1O15527 345 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 LALBAP00709 142 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 IGHG4P01861 327 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-204ENST00000376491 IL3RAP26951 378 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 PPP3R1P63098 170 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 Q3ZCU0 254 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 CT45A1Q5HYN5 189 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 C9orf66Q5T8R8 295 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 SLC25A48Q6ZT89 311 aaKnown RBP11.67□□□□□ -0.54
CLCN6-204ENST00000376491 CT45A3Q8NHU0 189 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 NEK7Q8TDX7 302 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF184Q99676 751 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-204ENST00000376491 RASL11BQ9BPW5 248 aa11.67□□□□□ -0.54
CLCN6-204ENST00000376491 HUWE1Q7Z6Z7 4374 aaKnown RBP11.66□□□□□ -0.54
CLCN6-204ENST00000376491 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 SEC14L6B5MCN3 397 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 RRP9O43818 475 aaKnown RBP11.66□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF780AO75290 641 aaPredicted RBP11.66□□□□□ -0.54
CLCN6-204ENST00000376491 GTF2F2P13984 249 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 PSMB8P28062 276 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 ECI1P42126 302 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 RIPK1Q13546 671 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 FHL3Q13643 280 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 SYT6Q5T7P8 510 aaPredicted RBP11.66□□□□□ -0.54
CLCN6-204ENST00000376491 OR8H1Q8NGG4 311 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 OR4K15Q8NH41 348 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 OR1L1Q8NH94 360 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 KCTD7Q96MP8 289 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 S100A13Q99584 98 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 C9orf16Q9BUW7 83 aa11.66□□□□□ -0.54
CLCN6-204ENST00000376491 PAK1IP1Q9NWT1 392 aaPredicted RBP11.66□□□□□ -0.54
CLCN6-204ENST00000376491 RCC2Q9P258 522 aaKnown RBP11.66□□□□□ -0.54
CLCN6-204ENST00000376491 TRAV8-7A0A075B6U6 113 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 GPX5O75715 221 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 IGF1P05019 195 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 SOX6P35712 828 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 RPS11P62280 158 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLCN6-204ENST00000376491 KIAA0141Q14154 515 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-204ENST00000376491 ASPHD1Q5U4P2 390 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 C4orf3Q8WVX3 66 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 SMIM19Q96E16 107 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 ASCL2Q99929 193 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 GNG12Q9UBI6 72 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF580Q9UK33 172 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 TRAPPC2LQ9UL33 140 aa11.65□□□□□ -0.54
CLCN6-204ENST00000376491 MCRIP1C9JLW8 97 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 TXNL1O43396 289 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 HBZP02008 142 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 SLC2A2P11168 524 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-204ENST00000376491 RCC1P18754 421 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-204ENST00000376491 VDAC1P21796 283 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 DCKP27707 260 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 ADARB1P78563 741 aaKnown RBP11.64□□□□□ -0.55
CLCN6-204ENST00000376491 LSAMPQ13449 338 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 DMKNQ6E0U4 476 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-204ENST00000376491 TMPRSS11AQ6ZMR5 421 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 GAPTQ8N292 157 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 PRR18Q8N4B5 295 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 STX19Q8N4C7 294 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 GHSRQ92847 366 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 MUL1Q969V5 352 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 RITA1Q96K30 269 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 KLK15Q9H2R5 256 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 BABAM2Q9NXR7 383 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 ETAA1Q9NY74 926 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 CLEC2DQ9UHP7 191 aa11.64□□□□□ -0.55
CLCN6-204ENST00000376491 G3V318 75 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms