RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 TMEM30BQ3MIR4 351 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 Q3ZCU0 254 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 LINC00596Q86U02 117 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 PRR18Q8N4B5 295 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 FAM71E2Q8N5Q1 922 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 ACBD7Q8N6N7 88 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 ZNF491Q8N8L2 437 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 C8orf31Q8N9H6 132 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 ABHD5Q8WTS1 349 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 PELI1Q96FA3 418 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 GNB4Q9HAV0 340 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 TRAPPC2LQ9UL33 140 aa10.99□□□□□ -0.65
PTCH1-202ENST00000375271 TRAV41A0A0B4J266 112 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 OR4C45A6NMZ5 311 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 LINC01619G3V211 115 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 ORC5O43913 435 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 SERPINA2P20848 420 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 CD40LGP29965 261 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 F2RL1P55085 397 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 GNB1P62873 340 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 RUNX1Q01196 453 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 MRPL28Q13084 256 aaKnown RBP10.98□□□□□ -0.65
PTCH1-202ENST00000375271 C6orf183Q5T699 404 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 MEDAGQ5VYS4 303 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 PARP16Q8N5Y8 322 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 TMEM104Q8NE00 496 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 OR52N1Q8NH53 320 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 TRUB1Q8WWH5 349 aaKnown RBP10.98□□□□□ -0.65
PTCH1-202ENST00000375271 ST6GALNAC6Q969X2 333 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 RSRP1Q9BUV0 290 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 ALG8Q9BVK2 526 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 ELOVL1Q9BW60 279 aa10.98□□□□□ -0.65
PTCH1-202ENST00000375271 ZNF736B4DX44 427 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-202ENST00000375271 I3L521 148 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 IFNA6P05013 189 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 RAB9AP51151 201 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 GBX2P52951 348 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-202ENST00000375271 RBM11P57052 281 aaKnown RBP10.97□□□□□ -0.65
PTCH1-202ENST00000375271 PLGLAQ15195 96 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 ECSCRQ19T08 205 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 MPV17LQ2QL34 196 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 SLC25A48Q6ZT89 311 aaKnown RBP10.97□□□□□ -0.65
PTCH1-202ENST00000375271 OR10V1Q8NGI7 309 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 ARPC1AQ92747 370 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 GABARAPL3Q9BY60 117 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 CST11Q9H112 138 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 KLK15Q9H2R5 256 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 SPACA1Q9HBV2 294 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 PLSCR3Q9NRY6 295 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 DNAH7Q8WXX0 4024 aa10.97□□□□□ -0.65
PTCH1-202ENST00000375271 A0A1W2PN81 502 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 TRIM64CA6NLI5 447 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 MCRIP1C9JLW8 97 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 G3V318 75 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 GEMIN2O14893 280 aaKnown RBP10.96□□□□□ -0.65
PTCH1-202ENST00000375271 ZNF780AO75290 641 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-202ENST00000375271 CDRT1O95170 752 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 CHRNA7P36544 502 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 POLR2IP36954 125 aaKnown RBP10.96□□□□□ -0.65
PTCH1-202ENST00000375271 SOX2P48431 317 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 SLURP1P55000 103 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 ACTBP60709 375 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 LSAMPQ13449 338 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 GALEQ14376 348 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 TRAT1Q6PIZ9 186 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 ADAMTSL5Q6ZMM2 481 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 AMIGO2Q86SJ2 522 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 ANKRD13BQ86YJ7 626 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 MYOZ3Q8TDC0 251 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 DLX4Q92988 240 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-202ENST00000375271 FLYWCH2Q96CP2 140 aaKnown RBP10.96□□□□□ -0.65
PTCH1-202ENST00000375271 JAM3Q9BX67 310 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 TAS2R4Q9NYW5 299 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 AP4S1Q9Y587 144 aa10.96□□□□□ -0.65
PTCH1-202ENST00000375271 C15orf65H3BRN8 121 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 NBR2O15453 112 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 LANCL1O43813 399 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 HLA-DRB1P01911 266 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 GTF2F2P13984 249 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF93P35789 620 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-202ENST00000375271 DDI2Q5TDH0 399 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 LHFPL3Q86UP9 236 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 LYPD6Q86Y78 171 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 SYS1Q8N2H4 156 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 OR51A2Q8NGJ7 313 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-202ENST00000375271 PDCD1LG2Q9BQ51 273 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 SPATA25Q9BR10 227 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 IFT22Q9H7X7 185 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 ETAA1Q9NY74 926 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 KCNIP1Q9NZI2 227 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 RNF150Q9ULK6 438 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 A3GALT2U3KPV4 340 aa10.95□□□□□ -0.66
PTCH1-202ENST00000375271 SLC31A2O15432 143 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 FADS2O95864 444 aaKnown RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 LGALS1P09382 135 aaKnown RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 IGHV4-30-4P0DP06 118 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 BLVRBP30043 206 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms