RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 MFSD2BA6NFX1 497 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 COX6B1P14854 86 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 RIGQ13278 110 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 LILRA6Q6PI73 481 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 BVESQ8NE79 360 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 C16orf97H3BN30 126 aa15.86■□□□□ 0.13
SNX27-202ENST00000368841 H3BTX0 84 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 ANKRD55Q3KP44 614 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 OR11H7Q8NGC8 314 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 OR2T10Q8NGZ9 312 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 ADIPOR1Q96A54 375 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 BET1LQ9NYM9 111 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 SCN9AQ15858 1988 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 ZNF826PQ6ZT77 177 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 TMEM171Q8WVE6 324 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 Q9N2K0 584 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 PAPPA2Q9BXP8 1791 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 SLC25A53Q5H9E4 307 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 WDR74Q6RFH5 385 aaPredicted RBP15.85■□□□□ 0.13
SNX27-202ENST00000368841 ASCL5Q7RTU5 278 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 ZNF738Q8NE65 137 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 TMEM38BQ9NVV0 291 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 HIGD1AQ9Y241 93 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 ZIC3O60481 467 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 PAFAH1B2P68402 229 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 C1orf185Q5T7R7 199 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 ASCC3Q8N3C0 2202 aaKnown RBP15.85■□□□□ 0.13
SNX27-202ENST00000368841 NKX2-8O15522 239 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 P2RY1P47900 373 aa15.85■□□□□ 0.13
SNX27-202ENST00000368841 PCMT1P22061 227 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 KLK13Q9UKR3 277 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 MIA3Q5JRA6 1907 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 J3QR06 171 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 SYNGR1O43759 233 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 CTSDP07339 412 aaPredicted RBP15.84■□□□□ 0.13
SNX27-202ENST00000368841 ZNF25P17030 456 aaPredicted RBP15.84■□□□□ 0.13
SNX27-202ENST00000368841 OTX1P32242 354 aaPredicted RBP15.84■□□□□ 0.13
SNX27-202ENST00000368841 IL24Q13007 206 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 SPICQ8N5J4 248 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 UPK3AO75631 287 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 LIFP15018 202 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 WDR73Q6P4I2 378 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 ZNF383Q8NA42 475 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 ID1P41134 155 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 GABRA6Q16445 453 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 CES1P1Q9UKY3 287 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 RPS4Y2Q8TD47 263 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 GHITMQ9H3K2 345 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 IGSF11Q5DX21 431 aa15.84■□□□□ 0.13
SNX27-202ENST00000368841 METTL1Q9UBP6 276 aaKnown RBP15.84■□□□□ 0.13
SNX27-202ENST00000368841 MBPP02686 304 aaPredicted RBP15.83■□□□□ 0.13
SNX27-202ENST00000368841 ACAA1P09110 424 aaPredicted RBP15.83■□□□□ 0.13
SNX27-202ENST00000368841 VDAC1P21796 283 aa15.83■□□□□ 0.13
SNX27-202ENST00000368841 SGK494Q96LW2 274 aa15.83■□□□□ 0.13
SNX27-202ENST00000368841 RAB33BQ9H082 229 aa15.83■□□□□ 0.13
SNX27-202ENST00000368841 NEU3Q9UQ49 428 aa15.83■□□□□ 0.13
SNX27-202ENST00000368841 RPL31P62899 125 aaKnown RBP15.83■□□□□ 0.12
SNX27-202ENST00000368841 PRSS8Q16651 343 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 IGHV3-48P01763 117 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 DCAF10Q5QP82 559 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 PACRGQ96M98 296 aaPredicted RBP15.83■□□□□ 0.12
SNX27-202ENST00000368841 OR2V2Q96R30 315 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.12
SNX27-202ENST00000368841 ATP6V1FQ16864 119 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 TM4SF20Q53R12 229 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 VSTM2AQ8TAG5 236 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 HEXA-AS1Q9H8Q6 139 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 PPIAL4EA0A075B759 164 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 IGHV3-66A0A0C4DH42 116 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 PPIAL4DF5H284 164 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 SMPD2O60906 423 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 IGKV1D-16P01601 117 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 PPIAL4FP0DN26 164 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 CD82P27701 267 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 GPR6P46095 362 aaPredicted RBP15.83■□□□□ 0.12
SNX27-202ENST00000368841 PPIAL4AQ9Y536 164 aa15.83■□□□□ 0.12
SNX27-202ENST00000368841 PRDX2P32119 198 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 RSG1Q9BU20 258 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 SCN1AP35498 2009 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 DHRS7CA6NNS2 312 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 HIST1H1EP10412 219 aaKnown RBP15.82■□□□□ 0.12
SNX27-202ENST00000368841 TMEM251Q8N6I4 163 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 OR4B1Q8NGF8 309 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 WIPI2Q9Y4P8 454 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 SCN7AQ01118 1682 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 RAB29O14966 203 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 BGLAPP02818 100 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 PMS2CLQ68D20 193 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 C10orf111Q8N326 155 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 ASB5Q8WWX0 329 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 PAXXQ9BUH6 204 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 RUNX1Q01196 453 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 TEX30Q5JUR7 227 aa15.82■□□□□ 0.12
SNX27-202ENST00000368841 A1L4Q6 167 aa15.81■□□□□ 0.12
SNX27-202ENST00000368841 LMX1BO60663 402 aa15.81■□□□□ 0.12
SNX27-202ENST00000368841 DMKNQ6E0U4 476 aaPredicted RBP15.81■□□□□ 0.12
SNX27-202ENST00000368841 ADTRPQ96IZ2 230 aa15.81■□□□□ 0.12
SNX27-202ENST00000368841 METTL26Q96S19 204 aa15.81■□□□□ 0.12
SNX27-202ENST00000368841 PCED1AQ9H1Q7 454 aa15.81■□□□□ 0.12
SNX27-202ENST00000368841 GLRX2Q9NS18 164 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms