RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 RRP9O43818 475 aaKnown RBP8.11□□□□□ -1.11
CLRN3-201ENST00000368671 CD2P06729 351 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 GZMHP20718 246 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 VDAC1P21796 283 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 ZNF93P35789 620 aaPredicted RBP8.11□□□□□ -1.11
CLRN3-201ENST00000368671 ECI1P42126 302 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
CLRN3-201ENST00000368671 PPP3R1P63098 170 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 ID3Q02535 119 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 RAB40BQ12829 278 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 C9orf66Q5T8R8 295 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 ASCL4Q6XD76 172 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 CBR4Q8N4T8 237 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 Q8NFD4 153 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 GPR148Q8TDV2 347 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 RTN4IP1Q8WWV3 396 aaPredicted RBP8.11□□□□□ -1.11
CLRN3-201ENST00000368671 ORAI1Q96D31 301 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 Q96MT0 163 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 S1PR3Q99500 378 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 HSPB9Q9BQS6 159 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 GON7Q9BXV9 100 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 U3KQK5 164 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 KMT2CQ8NEZ4 4911 aaKnown RBP8.11□□□□□ -1.11
CLRN3-201ENST00000368671 A0A1W2PP11 408 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 ZNF736B4DX44 427 aaPredicted RBP8.1□□□□□ -1.11
CLRN3-201ENST00000368671 SEC14L6B5MCN3 397 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 H3BNX3 289 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 ORC5O43913 435 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 MOSP00540 346 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
CLRN3-201ENST00000368671 RAB6AP20340 208 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 CD1BP29016 333 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 BDKRB2P30411 391 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 FOXE3Q13461 319 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 KIR2DS1Q14954 304 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 MPV17LQ2QL34 196 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 NHLRC3Q5JS37 347 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 XAF1Q6GPH4 301 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 LINC00596Q86U02 117 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 PRR18Q8N4B5 295 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 STX19Q8N4C7 294 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 LINC00311Q8N616 119 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 TMEM104Q8NE00 496 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 OR52M1Q8NGK5 317 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 OR13C5Q8NGS8 318 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 RHOXF1Q8NHV9 184 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 TMEM106AQ96A25 262 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 ASCL2Q99929 193 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 IFT22Q9H7X7 185 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 TMEM138Q9NPI0 162 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 IL36GQ9NZH8 169 aa8.1□□□□□ -1.11
CLRN3-201ENST00000368671 RPL36Q9Y3U8 105 aaKnown RBP8.1□□□□□ -1.11
CLRN3-201ENST00000368671 LSM4Q9Y4Z0 139 aaKnown RBP8.1□□□□□ -1.11
CLRN3-201ENST00000368671 RYR3Q15413 4870 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 DYNC1I1O14576 645 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 MT-ND4P03905 459 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 ELANEP08246 267 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 LIMS3P0CW19 117 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 LIMS4P0CW20 117 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 MYF6P23409 242 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 CDX1P47902 265 aaPredicted RBP8.09□□□□□ -1.11
CLRN3-201ENST00000368671 SLC22A6Q4U2R8 563 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 KLHL22Q53GT1 634 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 OR2G6Q5TZ20 316 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 RPL22L1Q6P5R6 122 aaKnown RBP8.09□□□□□ -1.11
CLRN3-201ENST00000368671 C8orf31Q8N9H6 132 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 OR10V1Q8NGI7 309 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 OR4K15Q8NH41 348 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 C4orf3Q8WVX3 66 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 APH1BQ8WW43 257 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 ST6GALNAC6Q969X2 333 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 PLSCR3Q9NRY6 295 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 PAK1IP1Q9NWT1 392 aaPredicted RBP8.09□□□□□ -1.11
CLRN3-201ENST00000368671 FAM53CQ9NYF3 392 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 GNG12Q9UBI6 72 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 TRAPPC2LQ9UL33 140 aa8.09□□□□□ -1.11
CLRN3-201ENST00000368671 LOC100130705A0A1B0GUX0 176 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 C12orf77C9JDV5 145 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 MCRIP1C9JLW8 97 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 TXNL1O43396 289 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 ZNF780AO75290 641 aaPredicted RBP8.08□□□□□ -1.12
CLRN3-201ENST00000368671 LY86O95711 162 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 SLC2A2P11168 524 aaPredicted RBP8.08□□□□□ -1.12
CLRN3-201ENST00000368671 GTF2F2P13984 249 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 SOX6P35712 828 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 ETV1P50549 477 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 F2RL1P55085 397 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 CFHR3Q02985 330 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 RIPK1Q13546 671 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 SMN1Q16637 294 aaKnown RBP8.08□□□□□ -1.12
CLRN3-201ENST00000368671 ZNF260Q3ZCT1 412 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 CCDC58Q4VC31 144 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 SYT6Q5T7P8 510 aaPredicted RBP8.08□□□□□ -1.12
CLRN3-201ENST00000368671 ZFP1Q6P2D0 407 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 ZNF497Q6ZNH5 498 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 SLC25A48Q6ZT89 311 aaKnown RBP8.08□□□□□ -1.12
CLRN3-201ENST00000368671 RNF152Q8N8N0 203 aa8.08□□□□□ -1.12
CLRN3-201ENST00000368671 ZNF439Q8NDP4 499 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms