RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIR2DS1Q14954 304 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 OR8H1Q8NGG4 311 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 DUX3Q96PT4 197 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 S1PR3Q99500 378 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF184Q99676 751 aaPredicted RBP12.57□□□□□ -0.4
CKS1B-202ENST00000368436 S100A14Q9HCY8 104 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 RCC2Q9P258 522 aaKnown RBP12.57□□□□□ -0.4
CKS1B-202ENST00000368436 IGHV3-43A0A0B4J1X8 118 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 TRBV5-5A0A0J9YX44 114 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF736B4DX44 427 aaPredicted RBP12.56□□□□□ -0.4
CKS1B-202ENST00000368436 SLC31A2O15432 143 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 RAMP3O60896 148 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 LALBAP00709 142 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 IGHV3-43DP0DP04 118 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 VHLP40337 213 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 CFHR3Q02985 330 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 RIPK1Q13546 671 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 GPR50Q13585 617 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 GPR176Q14439 515 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 TMEM30BQ3MIR4 351 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 DMKNQ6E0U4 476 aaPredicted RBP12.56□□□□□ -0.4
CKS1B-202ENST00000368436 GAPTQ8N292 157 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 PQLC1Q8N2U9 271 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 OR13C5Q8NGS8 318 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 GHSRQ92847 366 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 MRPS24Q96EL2 167 aaKnown RBP12.56□□□□□ -0.4
CKS1B-202ENST00000368436 WWC2-AS2Q96NR7 200 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 SPACA1Q9HBV2 294 aa12.56□□□□□ -0.4
CKS1B-202ENST00000368436 IRGMA1A4Y4 181 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 MAGEA13PA6NCF6 341 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 C12orf77C9JDV5 145 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 AIPO00170 330 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 TXNL1O43396 289 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 IGHG4P01861 327 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 ELANEP08246 267 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF134P52741 427 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 RPS11P62280 158 aaKnown RBP eCLIP12.55□□□□□ -0.4
CKS1B-202ENST00000368436 CT45A1Q5HYN5 189 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 CXorf66Q5JRM2 361 aaPredicted RBP12.55□□□□□ -0.4
CKS1B-202ENST00000368436 STX19Q8N4C7 294 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 FAM71E2Q8N5Q1 922 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF555Q8NEP9 628 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 OR8U1Q8NH10 309 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 CT45A3Q8NHU0 189 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 NEK7Q8TDX7 302 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 TFAP2CQ92754 450 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 RDH12Q96NR8 316 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 RASL11BQ9BPW5 248 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF580Q9UK33 172 aa12.55□□□□□ -0.4
CKS1B-202ENST00000368436 DIMT1Q9UNQ2 313 aaKnown RBP12.55□□□□□ -0.4
CKS1B-202ENST00000368436 EXOSC1Q9Y3B2 195 aaKnown RBP12.55□□□□□ -0.4
CKS1B-202ENST00000368436 TRAV8-7A0A075B6U6 113 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 MCRIP1C9JLW8 97 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
CKS1B-202ENST00000368436 FSTP19883 344 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 F2RL1P55085 397 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 DEFB136Q30KP8 78 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 Q499Y3 187 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 YIF1BQ5BJH7 314 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 SYT6Q5T7P8 510 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-202ENST00000368436 STEAP3Q658P3 488 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 LCNL1Q6ZST4 164 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF485Q8NCK3 441 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 HSPB9Q9BQS6 159 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 RAB9BQ9NP90 201 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-202ENST00000368436 CLEC2DQ9UHP7 191 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 TRAPPC2LQ9UL33 140 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 LSM4Q9Y4Z0 139 aaKnown RBP12.54□□□□□ -0.4
CKS1B-202ENST00000368436 TENM3Q9P273 2699 aa12.54□□□□□ -0.4
CKS1B-202ENST00000368436 TRBV5-7A0A0A0MS05 114 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 SPINT2O43291 252 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 SC5DO75845 299 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 IGF1P05019 195 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
CKS1B-202ENST00000368436 VSIG8P0DPA2 414 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 MYL12AP19105 171 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 SOX6P35712 828 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 RAB25P57735 213 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 C6orf183Q5T699 404 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 C9orf66Q5T8R8 295 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 RAB12Q6IQ22 244 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 GLIPR1L1Q6UWM5 242 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 CDH26Q8IXH8 852 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 OR5M8Q8NGP6 311 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 OR4K15Q8NH41 348 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 MUL1Q969V5 352 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 PGLYRP3Q96LB9 341 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 ETAA1Q9NY74 926 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 GNG12Q9UBI6 72 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
CKS1B-202ENST00000368436 MRPS28Q9Y2Q9 187 aaKnown RBP12.53□□□□□ -0.4
CKS1B-202ENST00000368436 FAM90A10PA6NDY2 464 aa12.52□□□□□ -0.41
CKS1B-202ENST00000368436 FAM90A7PA6NKC0 464 aa12.52□□□□□ -0.41
CKS1B-202ENST00000368436 FAM90A23PA8MXZ1 464 aa12.52□□□□□ -0.41
CKS1B-202ENST00000368436 LANCL1O43813 399 aa12.52□□□□□ -0.41
CKS1B-202ENST00000368436 CA11O75493 328 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms