RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 C2orf73Q8N5S3 287 aaPredicted RBP1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 YIPF7Q8N8F6 280 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 OR5D18Q8NGL1 313 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 SPPL2BQ8TCT7 592 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 GTF2H4Q92759 462 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 HIST1H2BAQ96A08 127 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 C20orf166-AS1Q96NR2 134 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 DMAC2Q9NW81 257 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 MRPL16Q9NX20 251 aaKnown RBP1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 SCML1Q9UN30 329 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 SAMHD1Q9Y3Z3 626 aaKnown RBP1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 CEP170Q5SW79 1584 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 COL18A1P39060 1754 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 IQCF5A8MTL0 148 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 EFCAB9A8MZ26 197 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 SLC25A20O43772 301 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 AKR1C4P17516 323 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 INPP1P49441 399 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 PSG4Q00888 419 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 BSPH1Q075Z2 132 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 TSPAN31Q12999 210 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 SLAMF1Q13291 335 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 SKP2Q13309 424 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 PMS2P3Q13401 168 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 PDGFRLQ15198 375 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 OR8G1Q15617 311 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 CST6Q15828 149 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 DOLPP1Q86YN1 238 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 OR5C1Q8NGR4 320 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 MFSD8Q8NHS3 518 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 ANGPTL6Q8NI99 470 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 MTCH2Q9Y6C9 303 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 ATG2BQ96BY7 2078 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 KIAA0232Q92628 1395 aa1.42□□□□□ -2.18
ECHDC1-201ENST00000368287 IGHV3OR15-7A0A075B7D8 119 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 LINC00854A0A1B0GVQ3 168 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 IGSF23A1L1A6 192 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 C17orf98A8MV24 154 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 HSBP1L1C9JCN9 74 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 G3V3Q6 166 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 MKRN2OSH3BPM6 223 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 ADAP1O75689 374 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 KDELR2P33947 212 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 GABRA3P34903 492 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 ACTR1BP42025 376 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 ZNF181Q2M3W8 571 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 TMEM249Q2WGJ8 235 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 FAM229BQ4G0N7 80 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 PYCR3Q53H96 274 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 SPNS3Q6ZMD2 512 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 VN1R4Q7Z5H5 301 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 SYCE1Q8N0S2 351 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 C17orf78Q8N4C9 275 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 OR2V1Q8NHB1 315 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 DYNC2LI1Q8TCX1 351 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 HBEGFQ99075 208 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 CHMP5Q9NZZ3 219 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 BAHCC1Q9P281 2608 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 DSCAML1Q8TD84 2053 aa1.41□□□□□ -2.18
ECHDC1-201ENST00000368287 CACNA1GO43497 2377 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ADAMTSL1Q8N6G6 1762 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 LOC102725191A0A1B0GVB3 256 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 KLRC4-KLRK1H3BQV0 150 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 K7EQS6 105 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 SCN2BO60939 215 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 CTSEP14091 401 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 CBR1P16152 277 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ATF1P18846 271 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 CRABP1P29762 137 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 PSMD8P48556 350 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 SULT1A2P50226 295 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 FAM3AP98173 230 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 SYCP1Q15431 976 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 CENPWQ5EE01 88 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 RBM48Q5RL73 367 aaKnown RBP1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 HENMT1Q5T8I9 393 aaKnown RBP1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 NIT1Q86X76 327 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 BLIDQ8IZY5 108 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ZNF567Q8N184 647 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ZFAND2AQ8N6M9 145 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 OR10P1Q8NGE3 313 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 CD200R1Q8TD46 325 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 MED10Q9BTT4 135 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 CHST5Q9GZS9 411 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 OR52A5Q9H2C5 316 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 C11orf49Q9H6J7 331 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ASCL3Q9NQ33 180 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ZNF337Q9Y3M9 751 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 HSPE1-MOB4S4R3N1 261 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ITGB4P16144 1822 aa1.4□□□□□ -2.19
ECHDC1-201ENST00000368287 ARHGAP32A7KAX9 2087 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 TRPC5OSA6NMA1 111 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 B4DEV8 164 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 J3QKU1 62 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 CRYGDP07320 174 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 PSMA1P25786 263 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 ADORA1P30542 326 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 GRPRP30550 384 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 SPAM1P38567 509 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 GABARAPL2P60520 117 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms