RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CASC3O15234 703 aaKnown RBP0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 DEFA6Q01524 100 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 UAP1Q16222 522 aaPredicted RBP0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 HSP90AA4PQ58FG1 418 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 ACTL10Q5JWF8 245 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 AGTRAPQ6RW13 159 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 C2orf91Q6ZV80 131 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 NAA40Q86UY6 237 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 ZNF283Q8N7M2 679 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 OR4K17Q8NGC6 315 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 OR4A15Q8NGL6 344 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 OR6K2Q8NGY2 324 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 OR10A6Q8NH74 314 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 SUN5Q8TC36 379 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 AGR3Q8TD06 166 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 SPACA4Q8TDM5 124 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 ZMYND19Q96E35 227 aaPredicted RBP0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 MYCBPQ99417 103 aaPredicted RBP0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 MGLLQ99685 303 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 EBPLQ9BY08 206 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 FBXO44Q9H4M3 255 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 BABAM2Q9NXR7 383 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 SCML1Q9UN30 329 aa0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 PUS1Q9Y606 427 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-553P-201ENST00000364047 COL6A6A6NMZ7 2263 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 SDK1Q7Z5N4 2213 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 IGHV3-15A0A0B4J1V0 119 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 RFXANKO14593 260 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 LY6HO94772 140 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 MBP02144 154 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 IGHV3-30-3P0DP02 117 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 TSPOP30536 169 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 LAMTOR1Q6IAA8 161 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 SLC35F6Q8N357 371 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 OR11H1Q8NG94 326 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 OR52K2Q8NGK3 314 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 TOP1MTQ969P6 601 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 UPK3BQ9BT76 320 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 COPS4Q9BT78 406 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 ZNF426Q9BUY5 554 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 ZNF471Q9BX82 626 aaPredicted RBP0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 CYSTM1Q9H1C7 97 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 FBXL15Q9H469 300 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 SOX21Q9Y651 276 aaPredicted RBP0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 USH1CQ9Y6N9 552 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 CACNA1SQ13698 1873 aa0.67□□□□□ -2.3
RNU6-553P-201ENST00000364047 AK9Q5TCS8 1911 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 A0A1W2PPV4 95 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 DHRS12A0PJE2 317 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 ZNF705DP0CH99 300 aaPredicted RBP0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 ZNF705BP0CI00 300 aaPredicted RBP0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 GIMD1P0DJR0 217 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 RAP1GDS1P52306 607 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 HBMQ6B0K9 141 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 EBLN2Q6P2I7 272 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 Q6ZTI0 123 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 OR9I1Q8NGQ6 314 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 EBNA1BP2Q99848 306 aaKnown RBP0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 SYT4Q9H2B2 425 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 HAUS4Q9H6D7 363 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 NCKAP5O14513 1909 aa0.66□□□□□ -2.3
RNU6-553P-201ENST00000364047 TTC41PQ6P2S7 1318 aa0.65□□□□□ -2.3
RNU6-553P-201ENST00000364047 B4DEV8 164 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 H0YIV9 168 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 H3BPC8 53 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 PSMD11O00231 422 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 UBDO15205 165 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 FBP1P09467 338 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 SLC25A16P16260 332 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 PSMA1P25786 263 aaKnown RBP0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 RANBP1P43487 201 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 PDGFRLQ15198 375 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 MRPL51Q4U2R6 128 aaKnown RBP0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 FAHD1Q6P587 224 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 FAM43BQ6ZT52 329 aaPredicted RBP0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 GLT6D1Q7Z4J2 308 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 OR2AE1Q8NHA4 323 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 DTD1Q8TEA8 209 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 GALMQ96C23 342 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 CIB1Q99828 191 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 PRSS27Q9BQR3 290 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 C1QTNF6Q9BXI9 259 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 CDCA4Q9BXL8 241 aa0.65□□□□□ -2.31
RNU6-553P-201ENST00000364047 IGKV2-40A0A087WW87 121 aaPredicted RBP0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 C11orf86A6NJI1 115 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 A8MUN3 132 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 KDELR3O43731 214 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 SNAI1O95863 264 aaPredicted RBP0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 IGKV2D-40P01614 121 aaPredicted RBP0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 DEKP35659 375 aaKnown RBP0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 PPP1CCP36873 323 aaKnown RBP0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 GABARAPL2P60520 117 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 RELAQ04206 551 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 MAPK14Q16539 360 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 FAM162BQ5T6X4 162 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 RASL11AQ6T310 242 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 FAM183BPQ6ZVS7 135 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 LHFPL5Q8TAF8 219 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 RNF133Q8WVZ7 376 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 FAAP24Q9BTP7 215 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms