RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CBLN2Q8IUK8 224 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 PBDC1Q9BVG4 233 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 MAGT1Q9H0U3 335 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 TRAV17A0A0B4J275 112 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 C9JQL5 133 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 SIRPB1O00241 398 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 CHST1O43916 411 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 TUBG1P23258 451 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 LMO1P25800 156 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 PSG7Q13046 419 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 SRSF6Q13247 344 aaKnown RBP18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 OR8G1Q15617 311 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 GCNT2Q8N0V5 402 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 C1orf162Q8NEQ5 155 aaPredicted RBP18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 TUBG2Q9NRH3 451 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 MBNL3Q9NUK0 354 aaKnown RBP18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 TAAR3PQ9P1P4 343 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 WIPI2Q9Y4P8 454 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 OTOGLQ3ZCN5 2332 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 A0A1W2PR80 420 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 TSPAN9O75954 239 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 HOXC12P31275 282 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 CLINT1Q14677 625 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 HFEQ30201 348 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 IGF2-ASQ6U949 168 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 KDF1Q8NAX2 398 aaPredicted RBP18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 LSM10Q969L4 123 aaKnown RBP18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 GNPNAT1Q96EK6 184 aaPredicted RBP18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 RNF115Q9Y4L5 304 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 TTC28Q96AY4 2481 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 ESPL1Q14674 2120 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 OR5C1Q8NGR4 320 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 OR2G3Q8NGZ4 309 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 SARAFQ96BY9 339 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 EIF5A2Q9GZV4 153 aaKnown RBP18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 OR1A1Q9P1Q5 309 aa18.85■□□□□ 0.61
NKX2-1-201ENST00000354822 FAM186AA6NE01 2351 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 A0A1B0GW64 132 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 K7N7A8 449 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 ERVS71-1P61550 626 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 TESK1Q15569 626 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 TMEM182Q6ZP80 229 aaPredicted RBP18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 OR51H1Q8NH63 302 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 SCRT1Q9BWW7 348 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 SMDT1Q9H4I9 107 aa18.84■□□□□ 0.61
NKX2-1-201ENST00000354822 PRR33A8MZF0 331 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 IGKV3-15P01624 115 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 PSG2P11465 335 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 OMGP23515 440 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 ATP6V0CP27449 155 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 CD200P41217 278 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 FHITP49789 147 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 ASCL1P50553 236 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 CNEP1R1Q8N9A8 125 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 OR8G5Q8NG78 346 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 KLF14Q8TD94 323 aaPredicted RBP18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 GPR146Q96CH1 333 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 RAB40CQ96S21 281 aa18.83■□□□□ 0.61
NKX2-1-201ENST00000354822 COX5AP20674 150 aa18.83■□□□□ 0.6
NKX2-1-201ENST00000354822 PPT1P50897 306 aa18.83■□□□□ 0.6
NKX2-1-201ENST00000354822 RPL23AP62750 156 aaKnown RBP18.83■□□□□ 0.6
NKX2-1-201ENST00000354822 TCF15Q12870 199 aa18.83■□□□□ 0.6
NKX2-1-201ENST00000354822 IGFBP7Q16270 282 aa18.83■□□□□ 0.6
NKX2-1-201ENST00000354822 RBM7Q9Y580 266 aaKnown RBP18.83■□□□□ 0.6
NKX2-1-201ENST00000354822 GRPP07492 148 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 KIR2DL2P43627 348 aaPredicted RBP18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 DYNLT3P51808 116 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 ALKBH6Q3KRA9 238 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 FAM213BQ8TBF2 198 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 TMEM171Q8WVE6 324 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 HES4Q9HCC6 221 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 MLXQ9UH92 298 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 C3orf80F5H4A9 247 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 C1QL1O75973 258 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 TMEM50AO95807 157 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 IGLV2-14P01704 120 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 OR10Z1Q8NGY1 313 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 RNASE11Q8TAA1 199 aaKnown RBP18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 OBP2BQ9NPH6 170 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 LIN7CQ9NUP9 197 aaKnown RBP18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 KCNIP1Q9NZI2 227 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 PRELID1Q9Y255 219 aa18.82■□□□□ 0.6
NKX2-1-201ENST00000354822 PTPRBP23467 1997 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 BTBD17A6NE02 478 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 CEACAM1P13688 526 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 NFYBP25208 207 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 PAX9P55771 341 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 STX12Q86Y82 276 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 SMCO4Q9NRQ5 59 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 DFFBO76075 338 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 CST7O76096 145 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 HAND1O96004 215 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 WT1P19544 449 aaPredicted RBP18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 ODF3L1Q8IXM7 274 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 PRR18Q8N4B5 295 aa18.81■□□□□ 0.6
NKX2-1-201ENST00000354822 RNF212BA8MTL3 300 aa18.8■□□□□ 0.6
NKX2-1-201ENST00000354822 CEACAM6P40199 344 aa18.8■□□□□ 0.6
NKX2-1-201ENST00000354822 WDR31Q8NA23 367 aa18.8■□□□□ 0.6
NKX2-1-201ENST00000354822 ATP5SQ99766 215 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms