RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 BEX1Q9HBH7 125 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 C1RLQ9NZP8 487 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 PITPNC1Q9UKF7 332 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 HSF4Q9ULV5 492 aa11.33□□□□□ -0.6
LIMS1-201ENST00000332345 AMMECR1Q9Y4X0 333 aaPredicted RBP11.33□□□□□ -0.6
LIMS1-201ENST00000332345 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 NOTOA8MTQ0 251 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 SDCBPO00560 298 aaPredicted RBP11.32□□□□□ -0.6
LIMS1-201ENST00000332345 SOCS1O15524 211 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 GADD45AP24522 165 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 BRS3P32247 399 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 VEGFCP49767 419 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 RAB13P51153 203 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 RAG2P55895 527 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 LY6EQ16553 131 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 PLA1AQ53H76 456 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 DHRS7BQ6IAN0 325 aaPredicted RBP11.32□□□□□ -0.6
LIMS1-201ENST00000332345 CCDC144NLQ6NUI1 221 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 Q6ZTK2 550 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 DTX3Q8N9I9 347 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 SULT4A1Q9BR01 284 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 KRTAP3-2Q9BYR7 98 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 LIN7BQ9HAP6 207 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 MBNL3Q9NUK0 354 aaKnown RBP11.32□□□□□ -0.6
LIMS1-201ENST00000332345 PSG11Q9UQ72 335 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 MMP24Q9Y5R2 645 aa11.32□□□□□ -0.6
LIMS1-201ENST00000332345 A0A0A6YYD4 124 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 TMEM272A0A1B0GTI8 110 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 METTL21EPA6NDL7 271 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 OOSP1A8MZH6 123 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 C12orf77C9JDV5 145 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 F2RL2O00254 374 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 HBZP02008 142 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 RCC1P18754 421 aaPredicted RBP11.31□□□□□ -0.6
LIMS1-201ENST00000332345 RAB6AP20340 208 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 SDC2P34741 201 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 LEAP2Q969E1 77 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 PTX4Q96A99 478 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 TAF9BQ9HBM6 251 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 CHMP1AQ9HD42 196 aaPredicted RBP11.31□□□□□ -0.6
LIMS1-201ENST00000332345 GFOD1Q9NXC2 390 aa11.31□□□□□ -0.6
LIMS1-201ENST00000332345 DNHD1Q96M86 4753 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 LY6LH3BQJ8 138 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 JUNBP17275 347 aaPredicted RBP11.3□□□□□ -0.6
LIMS1-201ENST00000332345 MNDAP41218 407 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 TMEM50BP56557 158 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 LOXL3P58215 753 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 RELBQ01201 579 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 MADCAM1Q13477 382 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 Q3ZCU0 254 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 TPTE2P1Q5T6R2 138 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 C8orf31Q8N9H6 132 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 UBALD1Q8TB05 177 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 MRPL30Q8TCC3 161 aaKnown RBP11.3□□□□□ -0.6
LIMS1-201ENST00000332345 TAF15Q92804 592 aaKnown RBP eCLIP11.3□□□□□ -0.6
LIMS1-201ENST00000332345 RPEQ96AT9 228 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 GALMQ96C23 342 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 ABRACLQ9P1F3 81 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 GNG12Q9UBI6 72 aa11.3□□□□□ -0.6
LIMS1-201ENST00000332345 CLPSL1A2RUU4 121 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 TRIM64CA6NLI5 447 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 TSPAN9O75954 239 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 NAPSAO96009 420 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 SLC2A2P11168 524 aaPredicted RBP11.29□□□□□ -0.6
LIMS1-201ENST00000332345 MDKP21741 143 aaPredicted RBP11.29□□□□□ -0.6
LIMS1-201ENST00000332345 GNG10P50151 68 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 HTD2P86397 168 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 UTF1Q5T230 341 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 STEAP3Q658P3 488 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 LINC00311Q8N616 119 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 OR1L1Q8NH94 360 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 RAB3CQ96E17 227 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 ARHGAP5-AS1Q96IT6 56 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 OCSTAMPQ9BR26 566 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 PECRQ9BY49 303 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 C16orf95Q9H693 158 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 OR2S2Q9NQN1 319 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 MGAT4AQ9UM21 535 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
LIMS1-201ENST00000332345 TRBV6-6A0A0A6YYG2 114 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 IGHV3-43A0A0B4J1X8 118 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 SMIM30A4D0T7 59 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 A6NDX4 124 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 FOXI3A8MTJ6 420 aaPredicted RBP11.28□□□□□ -0.6
LIMS1-201ENST00000332345 AIREO43918 545 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 RGS11O94810 467 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 IGHV3-43DP0DP04 118 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 IL3RAP26951 378 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 RAB7AP51149 207 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 EFNB2P52799 333 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms