RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 HAX1O00165 279 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 SDCBPO00560 298 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-201ENST00000311943 RBP4P02753 201 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 PTHLHP12272 177 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 CFPP27918 469 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 LINC00596Q86U02 117 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 GAPTQ8N292 157 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 FAM89BQ8N5H3 189 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 PECRQ9BY49 303 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 PLEKHJ1Q9NW61 149 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 GHRLQ9UBU3 117 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 ZNF230Q9UIE0 474 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-201ENST00000311943 VPREB3Q9UKI3 123 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 A0A087WXM4 84 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 A0A087X0M5 115 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 A0A1B0GX30 115 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 FUOMA2VDF0 154 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 TRIM64CA6NLI5 447 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 RAB27BO00194 218 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 FCER2P06734 321 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 UBBP0CG47 229 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 HTR1DP28221 377 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 PPP1CCP36873 323 aaKnown RBP9.68□□□□□ -0.86
SCFD1-201ENST00000311943 BLCAPP62952 87 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 PAX5Q02548 391 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 LRRC75BQ2VPJ9 315 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 TMEM95Q3KNT9 176 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 NEDD4LQ96PU5 975 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 LINC00574Q9H8X3 128 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 IGKV1D-8A0A087WSZ0 117 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 SCTP09683 121 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 RPS19P39019 145 aaKnown RBP9.67□□□□□ -0.86
SCFD1-201ENST00000311943 LINC00205P59089 165 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 VBP1P61758 197 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 MADCAM1Q13477 382 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 CT45A1Q5HYN5 189 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 SFXN4Q6P4A7 337 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 C12orf54Q6X4T0 127 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 CT45A3Q8NHU0 189 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 LINC01006Q8NI28 216 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 LGALS14Q8TCE9 139 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 ZFAND2BQ8WV99 257 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 IL1F10Q8WWZ1 152 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 MALSU1Q96EH3 234 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 PCDHB16Q9NRJ7 776 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 MBNL3Q9NUK0 354 aaKnown RBP9.67□□□□□ -0.86
SCFD1-201ENST00000311943 OR1A1Q9P1Q5 309 aa9.67□□□□□ -0.86
SCFD1-201ENST00000311943 TOR1AO14656 332 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 NAPSAO96009 420 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 CD34P28906 385 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 RAG2P55895 527 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 IDNKQ5T6J7 187 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 TPTE2P1Q5T6R2 138 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 Q6ZTK2 550 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 OR56B4Q8NH76 319 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 OR9G1Q8NH87 305 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 CREB3L1Q96BA8 519 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 KCTD7Q96MP8 289 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 MMP28Q9H239 520 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 DPAGT1Q9H3H5 408 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 GFOD1Q9NXC2 390 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 DPM3Q9P2X0 92 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 POMT1Q9Y6A1 747 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 IGKV1-6A0A0C4DH72 117 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A10PA6NDY2 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A18PA6NE21 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A16PA6NEW6 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A20PA6NIJ5 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A7PA6NKC0 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 NOTOA8MTQ0 251 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A22PA8MWA6 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A12PA8MX19 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A5PA8MXJ8 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A23PA8MXZ1 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 PDCD5O14737 125 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 AIREO43918 545 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A15PP0C7V4 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A13PP0C7W8 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A14PP0C7W9 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 FAM90A24PP0C7X0 464 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 GZMHP20718 246 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 KCNJ3P48549 501 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 HNF4GQ14541 408 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 SLC16A12Q6ZSM3 486 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 OR2W3Q7Z3T1 314 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 ZNF439Q8NDP4 499 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 ATG5Q9H1Y0 275 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 SPACA1Q9HBV2 294 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
SCFD1-201ENST00000311943 TBL2Q9Y4P3 447 aaKnown RBP9.66□□□□□ -0.86
SCFD1-201ENST00000311943 A0A1W2PPI3 338 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 A6NDX4 124 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 TIMM23O14925 209 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 TFAP2AP05549 437 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 GALP22466 123 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 HERPUD1Q15011 391 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 SLC25A38Q96DW6 304 aa9.65□□□□□ -0.86
SCFD1-201ENST00000311943 NCOR1P1Q9H4R4 102 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms