RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 OR2J1Q9GZK6 312 aa12.15□□□□□ -0.47
PRKCB-201ENST00000303531 A0A0J9YW62 118 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 SYNGR1O43759 233 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 SNCGO76070 127 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 FSTP19883 344 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 MRPL54Q6P161 138 aaKnown RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 FLYWCH2Q96CP2 140 aaKnown RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 PILRAQ9UKJ1 303 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 LY75O60449 1722 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 SRSF10O75494 262 aaKnown RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 CDX2Q99626 313 aaPredicted RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 ANGPTL4Q9BY76 406 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 ELOBQ15370 118 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 OR4X1Q8NH49 305 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 CLN8Q9UBY8 286 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 PITX3O75364 302 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 PPP1CCP36873 323 aaKnown RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 FAM74A3Q4VXF1 159 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 Q6ZN92 141 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 TTTY12Q9BZ98 90 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 RTP5Q14D33 572 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 TMEM255AQ5JRV8 349 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 FAM27BQ5VT28 67 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 C10orf113Q5VZT2 155 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 APOBEC4Q8WW27 367 aaKnown RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 GMPPAQ96IJ6 420 aaPredicted RBP12.14□□□□□ -0.47
PRKCB-201ENST00000303531 M0R296 226 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 NGFRP08138 427 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 HIST3H3Q16695 136 aa12.14□□□□□ -0.47
PRKCB-201ENST00000303531 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 HELTA6NFD8 242 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 APELAP0DMC3 54 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 NPY1RP25929 384 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 AMELYQ99218 206 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 GHITMQ9H3K2 345 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 ASCL3Q9NQ33 180 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 PIPOXQ9P0Z9 390 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 A0A0U1RQV5 110 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 CTXND1A0A1B0GTU2 59 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 MRPL30Q8TCC3 161 aaKnown RBP12.13□□□□□ -0.47
PRKCB-201ENST00000303531 RND1Q92730 232 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 CXorf1O96002 111 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 COL8A1P27658 744 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
PRKCB-201ENST00000303531 F12P00748 615 aaPredicted RBP12.13□□□□□ -0.47
PRKCB-201ENST00000303531 TMEM65Q6PI78 240 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 CDX4O14627 284 aaPredicted RBP12.13□□□□□ -0.47
PRKCB-201ENST00000303531 PSG4Q00888 419 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 FBLIM1Q8WUP2 373 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 NPTNQ9Y639 398 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 A0A087X0M5 115 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 A0A1B0GX30 115 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 IGSF23A1L1A6 192 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 VAX1Q5SQQ9 334 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
PRKCB-201ENST00000303531 A0A1W2PP11 408 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 TSPAN2O60636 221 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 PRSS1P07477 247 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 PGA4P0DJD7 388 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 PGA5P0DJD9 388 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 COL10A1Q03692 680 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 OR5AC2Q9NZP5 309 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 INSIG2Q9Y5U4 225 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 A0A1W2PPE3 182 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 CELA2AP08217 269 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 COX19Q49B96 90 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 PLXNB2O15031 1838 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 BRS3P32247 399 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.12□□□□□ -0.47
PRKCB-201ENST00000303531 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 OR2T8A6NH00 312 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 IGSF11Q5DX21 431 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 OR1L1Q8NH94 360 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 CKAP5Q14008 2032 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 NPAS1Q99742 590 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 KHDC3LQ587J8 217 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
PRKCB-201ENST00000303531 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 DCAF16Q9NXF7 216 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 HSF4Q9ULV5 492 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 DSPPQ9NZW4 1301 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 F2RL2O00254 374 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 SMIM6P0DI80 62 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 CEBPEQ15744 281 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 FDX2Q6P4F2 183 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 PERPQ96FX8 193 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 TMEM191AQ9H0A3 160 aa12.12□□□□□ -0.47
PRKCB-201ENST00000303531 IER3P46695 156 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 RUNX1Q01196 453 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 C19orf57Q0VDD7 668 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms