RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 GFOD1Q9NXC2 390 aa6.98□□□□□ -1.29
TPM3-201ENST00000271850 IL36GQ9NZH8 169 aa6.98□□□□□ -1.29
TPM3-201ENST00000271850 DHDHQ9UQ10 334 aa6.98□□□□□ -1.29
TPM3-201ENST00000271850 ST3GAL6Q9Y274 331 aa6.98□□□□□ -1.29
TPM3-201ENST00000271850 WBP4O75554 376 aaKnown RBP6.97□□□□□ -1.29
TPM3-201ENST00000271850 HTR3BO95264 441 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 IGHG4P01861 327 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 IGFBP3P17936 291 aaPredicted RBP6.97□□□□□ -1.29
TPM3-201ENST00000271850 RAB3AP20336 220 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 PSMB8P28062 276 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 SLC6A1P30531 599 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 CDX1P47902 265 aaPredicted RBP6.97□□□□□ -1.29
TPM3-201ENST00000271850 KCNJ3P48549 501 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 ZNF137PP52743 207 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 RPS11P62280 158 aaKnown RBP eCLIP6.97□□□□□ -1.29
TPM3-201ENST00000271850 GPR50Q13585 617 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 KIR2DS1Q14954 304 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 PNLIPRP3Q17RR3 467 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 CT45A1Q5HYN5 189 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 OR2G6Q5TZ20 316 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 TEX38Q6PEX7 206 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 ZNF497Q6ZNH5 498 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 SLC16A12Q6ZSM3 486 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 MOB3BQ86TA1 216 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 SATL1Q86VE3 508 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 LYPD6Q86Y78 171 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 CBR4Q8N4T8 237 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 COMMD1Q8N668 190 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 OR10X1Q8NGY0 326 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 CT45A3Q8NHU0 189 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 CCDC107Q8WV48 283 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 TSEN15Q8WW01 171 aaKnown RBP6.97□□□□□ -1.29
TPM3-201ENST00000271850 S1PR3Q99500 378 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 MCRIP2Q9BUT9 160 aaKnown RBP6.97□□□□□ -1.29
TPM3-201ENST00000271850 BARHL1Q9BZE3 327 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 GPR61Q9BZJ8 451 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 FAM192AQ9GZU8 254 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 KLK15Q9H2R5 256 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 GNB4Q9HAV0 340 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 RCC2Q9P258 522 aaKnown RBP6.97□□□□□ -1.29
TPM3-201ENST00000271850 U3KQK5 164 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 HYDINQ4G0P3 5121 aa6.97□□□□□ -1.29
TPM3-201ENST00000271850 TRAV8-7A0A075B6U6 113 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 NCBP2LA6PVI3 153 aaKnown RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 C12orf77C9JDV5 145 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 AP4M1O00189 453 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 SDCBPO00560 298 aaPredicted RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 OR7C1O76099 320 aaPredicted RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 MT-ND4P03905 459 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 GAPDHP04406 335 aaKnown RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 IGF1P05019 195 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 SERPINA2P20848 420 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 CNTFRP26992 372 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 CD1BP29016 333 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 PPIFP30405 207 aaKnown RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 ETV1P50549 477 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 RAB25P57735 213 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 SLC35B1P78383 322 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 ADARB1P78563 741 aaKnown RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 FOXE3Q13461 319 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 RSU1Q15404 277 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 SIGIRRQ6IA17 410 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 SLC25A48Q6ZT89 311 aaKnown RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 FOXRED2Q8IWF2 684 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 ODF3L1Q8IXM7 274 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 GAPTQ8N292 157 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 C8orf31Q8N9H6 132 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 OR52M1Q8NGK5 317 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 OR8U1Q8NH10 309 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 OR52N1Q8NH53 320 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 OR1L1Q8NH94 360 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 DPF1Q92782 380 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 ARL11Q969Q4 196 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 TMEM106AQ96A25 262 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 GAR1Q9NY12 217 aaKnown RBP6.96□□□□□ -1.3
TPM3-201ENST00000271850 GMPPBQ9Y5P6 360 aa6.96□□□□□ -1.3
TPM3-201ENST00000271850 TRBV5-5A0A0J9YX44 114 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 TMEM30CPA0ZSE6 113 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 G3V318 75 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 I3L521 148 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 RAMP3O60896 148 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 MOSP00540 346 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 ELANEP08246 267 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 RPSAP08865 295 aaKnown RBP6.95□□□□□ -1.3
TPM3-201ENST00000271850 ZNF93P35789 620 aaPredicted RBP6.95□□□□□ -1.3
TPM3-201ENST00000271850 ECI1P42126 302 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 GNB1P62873 340 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 NDPQ00604 133 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 RAB40BQ12829 278 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 GNMTQ14749 295 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 KLHL22Q53GT1 634 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 C19orf54Q5BKX5 351 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 DDI2Q5TDH0 399 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 ZNF485Q8NCK3 441 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 OR10V1Q8NGI7 309 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 OR2T10Q8NGZ9 312 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 C4orf3Q8WVX3 66 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 PGLYRP3Q96LB9 341 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 KCTD7Q96MP8 289 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 GPER1Q99527 375 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms