RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 C19orf48Q6RUI8 117 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 PARP11Q9NR21 331 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 TRBV5-3A0A0A0MS03 114 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 TRAV39A0A0B4J263 110 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 A0A1W2PPC1 479 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 OR4C45A6NMZ5 311 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 PDE6DO43924 150 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 PRSS23O95084 383 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 CLDN14O95500 239 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 LOXL3P58215 753 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 MESP2Q0VG99 397 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 RIGQ13278 110 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 MMDQ15546 238 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 ZNF519Q8TB69 540 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 ZNF596Q8TC21 504 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 LURAP1Q96LR2 239 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 Q9N2K0 584 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 RABAC1Q9UI14 185 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 NUP205Q92621 2012 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 TRIP12Q14669 1992 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-201ENST00000254630 A0A0U1RQV5 110 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 M0R2Z0 102 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 ADAM11O75078 769 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 IRF3Q14653 427 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 TOMM20LQ6UXN7 152 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 BVESQ8NE79 360 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 IGKV3-7A0A075B6H7 116 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 FCGR3AP08637 254 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 FAM106CPP0CH98 169 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 VSIG8P0DPA2 414 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 G0S2P27469 103 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 HOGA1Q86XE5 327 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 TEX29Q8N6K0 151 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 SLC2A9Q9NRM0 540 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 DUXBA0A1W2PPF3 345 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 TO15178 435 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 ANKRD55Q3KP44 614 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 DPPA3Q6W0C5 159 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 RFLNBQ8N5W9 214 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 WNT2BQ93097 391 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 MARVELD1Q9BSK0 173 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 SRXN1Q9BYN0 137 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 TOLLIPQ9H0E2 274 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 MIXL1Q9H2W2 232 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 HILPDAQ9Y5L2 63 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 BRCA1P38398 1863 aaKnown RBP7.57□□□□□ -1.2
PTCD3-201ENST00000254630 DHRS7CA6NNS2 312 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 CLDN34H7C241 214 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 ZNHIT1O43257 154 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 CYB5R3P00387 301 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-201ENST00000254630 SULT1A1P50225 295 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 RPL31P62899 125 aaKnown RBP7.57□□□□□ -1.2
PTCD3-201ENST00000254630 VAMP3Q15836 100 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 KCNMB1Q16558 191 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 IQCJQ1A5X6 159 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 GBGT1Q8N5D6 347 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 TMEM116Q8NCL8 245 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 STARD4Q96DR4 205 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 SEC11CQ9BY50 192 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 FOXJ2Q9P0K8 574 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 CA11O75493 328 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 DXOO77932 396 aaKnown RBP7.57□□□□□ -1.2
PTCD3-201ENST00000254630 TTRP02766 147 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 WNT5AP41221 380 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 RSPO4Q2I0M5 234 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-201ENST00000254630 TMEM37Q8WXS4 190 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 ANKRD12Q6UB98 2062 aa7.57□□□□□ -1.2
PTCD3-201ENST00000254630 HPRT1P00492 218 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 EFNB2P52799 333 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 FAM27BQ5VT28 67 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 C10orf111Q8N326 155 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 METTL1Q9UBP6 276 aaKnown RBP7.56□□□□□ -1.2
PTCD3-201ENST00000254630 GAPDHP04406 335 aaKnown RBP7.56□□□□□ -1.2
PTCD3-201ENST00000254630 CAMPP49913 170 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 CLDN18P56856 261 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 TEPPQ6URK8 271 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 LYZL2Q7Z4W2 148 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 PRSS27Q9BQR3 290 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 IDI2-AS1Q9NZ38 188 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 SMCHD1A6NHR9 2005 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 OR2H2O95918 312 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 SLC35B1P78383 322 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 P2RY6Q15077 328 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 SLC25A47Q6Q0C1 308 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 ITLN1Q8WWA0 313 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 ADIPOR1Q96A54 375 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 SF3B6Q9Y3B4 125 aaKnown RBP7.56□□□□□ -1.2
PTCD3-201ENST00000254630 J3QR06 171 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 NPY1RP25929 384 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 FGF12P61328 243 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 CCL8P80075 99 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 PMS2P11Q13670 270 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 PRSS53Q2L4Q9 553 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 ATP1A1-AS1Q5TC04 95 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms