RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 HERPUD1Q15011 391 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 MPV17LQ2QL34 196 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 GNPNAT1Q96EK6 184 aaPredicted RBP10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 IL36GQ9NZH8 169 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 B4E171 279 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 PRSS44E7EML9 344 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 H3BQ15 152 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 NEURL1O76050 574 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 KRASP01116 189 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 IFNA4P05014 189 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 F2RP25116 425 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 HOXC12P31275 282 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 TSPAN7P41732 249 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 GFRA1P56159 465 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 MDP1Q86V88 176 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 TCTEX1D2Q8WW35 142 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 NANOS1Q8WY41 292 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 LYRM2Q9NU23 88 aaPredicted RBP10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 PSENENQ9NZ42 101 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 FZR1Q9UM11 496 aa10.78□□□□□ -0.68
RAB3IP-201ENST00000247833 IL2RGP31785 369 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 LHX2P50458 406 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 C4orf17Q53FE4 359 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 ZNF343Q6P1L6 599 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 OR5A2Q8NGI9 324 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 NINJ1Q92982 152 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 GPR146Q96CH1 333 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 OR2W1Q9Y3N9 320 aa10.77□□□□□ -0.68
RAB3IP-201ENST00000247833 CEBPZOSA8MTT3 80 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 TNFSF15O95150 251 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 ZNF816Q0VGE8 651 aaPredicted RBP10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 MRPL49Q13405 166 aaKnown RBP10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 TESK1Q15569 626 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 OR10V1Q8NGI7 309 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 OR2J1Q9GZK6 312 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 DECR2Q9NUI1 292 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 PITX3O75364 302 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 MT-CO3P00414 261 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 CEACAM6P40199 344 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 ERVS71-1P61550 626 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 PMP22Q01453 160 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 CLEC12BQ2HXU8 276 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 SPINK9Q5DT21 86 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 ASCL4Q6XD76 172 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 LRTM2Q8N967 370 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 RAB39BQ96DA2 213 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 DLL3Q9NYJ7 618 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 KCNIP1Q9NZI2 227 aa10.77□□□□□ -0.69
RAB3IP-201ENST00000247833 KLRC4-KLRK1H3BQV0 150 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 TMEM50AO95807 157 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 CD46P15529 392 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 CLDN18P56856 261 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 MED12LQ86YW9 2145 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 DEFB123Q8N688 67 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 RFESDQ8TAC1 157 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 RBMXL1Q96E39 390 aaKnown RBP10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 FGF23Q9GZV9 251 aaPredicted RBP10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 IGKV1-6A0A0C4DH72 117 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 C9orf172C9J069 976 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 DFFBO76075 338 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 GABRA2P47869 451 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 TBC1D28Q2M2D7 210 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 RTL8AQ9BWD3 113 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 PCNX2A6NKB5 2137 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 HEATR1Q9H583 2144 aaKnown RBP10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 A0A0G2JRQ6 117 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 K7N7A8 449 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 S100A2P29034 98 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 HLA-DRB3P79483 266 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 DLK1P80370 383 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 ZNF787Q6DD87 383 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 IFT22Q9H7X7 185 aa10.76□□□□□ -0.69
RAB3IP-201ENST00000247833 SPTA1P02549 2419 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 UBE2L5PA0A1B0GUS4 154 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 CYB5BO43169 146 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 ACAA1P09110 424 aaPredicted RBP10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 TPRX1Q8N7U7 411 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 ATP5SQ99766 215 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 ZNF665Q9H7R5 613 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 YIF1AO95070 293 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 HBE1P02100 147 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 HEXAP06865 529 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 CELA3BP08861 270 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 RAC2P15153 192 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 HOXA4Q00056 320 aaPredicted RBP10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 LILRB1Q8NHL6 650 aaPredicted RBP10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 TINAGQ9UJW2 476 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 DMDP11532 3685 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 POLEQ07864 2286 aa10.75□□□□□ -0.69
RAB3IP-201ENST00000247833 IGHV3-43A0A0B4J1X8 118 aa10.74□□□□□ -0.69
RAB3IP-201ENST00000247833 SYNGR2O43760 224 aa10.74□□□□□ -0.69
RAB3IP-201ENST00000247833 IGHV3-13P01766 116 aa10.74□□□□□ -0.69
RAB3IP-201ENST00000247833 IGHV3-7P01780 117 aa10.74□□□□□ -0.69
RAB3IP-201ENST00000247833 TFF1P04155 84 aa10.74□□□□□ -0.69
RAB3IP-201ENST00000247833 IGHV3-43DP0DP04 118 aa10.74□□□□□ -0.69
RAB3IP-201ENST00000247833 MDKP21741 143 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms