RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Orm3Q63805 206 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Pif1Q80SX8 650 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Znf574Q8BY46 900 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Eddm3bQ8K0E4 149 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vmn1r36Q8R2E3 305 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1270Q8VGP3 304 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Lysmd2Q9D7V2 215 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Aig1Q9D8B1 262 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Trav15d-1-dv6d-1A0A075B624 124 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sh2b3O09039 548 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Kcnk3O35111 409 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sh2d1bO35324 132 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Scd2P13011 358 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Rab3dP35276 219 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Slc25a4P48962 298 aaKnown RBP11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tcl1aP56280 116 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Lsm5P62322 91 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fam117aQ7TNF9 451 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Chrnb4Q8R493 495 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1393Q8VFA7 311 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 DohhQ99LN9 302 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Q9CYS6 286 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Arrdc2Q9D668 407 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Syt6Q9R0N8 511 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Bex3Q9WTZ9 124 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tmem196V9GX04 182 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vps13aQ5H8C4 3166 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm4131A0A140LJ24 318 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Igf2P09535 180 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp26P10076 861 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Klk1b26P36369 261 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hist1h2baP70696 127 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 VegfdP97946 358 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sys1Q78S06 156 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Il17fQ7TNI7 161 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 BtlaQ7TSA3 306 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fam76bQ80XP8 339 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Slc17a5Q8BN82 495 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cmc2Q8K199 79 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 NaxeQ8K4Z3 282 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tmem150bQ8R218 238 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cep41Q99NF3 373 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Atg12Q9CQY1 141 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Myoz1Q9JK37 296 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sdk2Q6V4S5 2176 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm38303A0A0A6YWW8 100 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr548-ps1A0A1B0GSG0 314 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr248E9Q1L6 309 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp108E9Q8I5 642 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Id4P41139 161 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 PtgfrP43117 366 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sirt6P59941 334 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr323Q5NCD0 323 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr452Q7TRV8 317 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sdhaf4Q8BTE0 104 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tox4Q8BU11 619 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vmn1r193Q8R258 319 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vmn1r220Q8R272 298 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Dtx2Q8R3P2 619 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1201Q8VGF5 307 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr38Q8VGP4 317 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Mrgpra6Q91ZC6 301 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tmem33Q9CR67 247 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gins3Q9CY94 216 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 1700069L16RikQ9D9H5 109 aa11.29□□□□□ -0.6
Nup88-203ENSMUST00000108531 Ighv1-43A0A0A6YXN5 117 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1157A2AVC4 312 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 SpxD3Z752 116 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Defb4P82019 63 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tmem18Q3TUD9 140 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gpr173Q6PI62 373 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 MpiQ924M7 423 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Dkkl1Q9QZL9 230 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Rspo1Q9Z132 265 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 4931429L15RikE9PVU2 379 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp229E9PWT2 705 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp760E9QAF5 666 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Klhl8P59280 629 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hist1h3aP68433 136 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hist1h3bP84228 136 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vmn1r15Q14C10 299 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Taar6Q5QD13 345 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zic4Q61467 341 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sat2Q6P8J2 170 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Nmnat2Q8BNJ3 307 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cd200r5Q8BTP3 270 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp87Q8K2A4 540 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cd226Q8K4F0 333 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Nectin4Q8R007 508 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Znf385aQ8VD12 386 aaKnown RBP11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1002Q8VFK2 318 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 D930007J09RikQ9D2K6 131 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Smco4Q9JIS3 59 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Pmaip1Q9JM54 103 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 EdarQ9R187 448 aa11.28□□□□□ -0.6
Nup88-203ENSMUST00000108531 Trip12G5E870 2025 aaKnown RBP11.27□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm9047B9EJX3 177 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm11009F7CWA7 138 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm10269G3UWD7 123 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Arg2O08691 354 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms