RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Lage3Q9CR70 148 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 TslpQ9JIE6 140 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 CalcrlQ9R1W5 463 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm7173A0A0G2JEB6 3132 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ighv9-4A0A0A6YWH6 117 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Tubb1A2AQ07 451 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Vmn2r108E9PYS0 855 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr920E9Q413 310 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm20509G3UZF1 325 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Prdx3P20108 257 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gabrg2P22723 474 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 FahP35505 419 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Fabp6P51162 128 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 CortP56469 109 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Trav7d-3Q5R1I1 112 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Prdx2Q61171 198 aaKnown RBP7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cdk6Q64261 326 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr263Q7TQT8 317 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Rhbdf2Q80WQ6 827 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cdkn3Q810P3 211 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Mfsd11Q8BJ51 449 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Scrt2Q8BTH6 311 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Znf322Q8BZ89 410 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Dnajc27Q8CFP6 273 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Agpat2Q8K3K7 278 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Slc29a4Q8R139 528 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Chmp1b1Q99LU0 199 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gkn1Q9CR36 201 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cldn23Q9D7D7 296 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Med11Q9D8C6 117 aa7.76□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Zscan4-ps2A0A1C7CYU6 506 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Nkx6-2D3Z4R4 277 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm29394H3BIW7 199 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Spin2fJ3QPU0 254 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 P01757 117 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cd79aP11911 220 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Zfp36P22893 319 aaKnown RBP7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Zscan4fQ3URS2 506 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 C1orf109Q499E6 217 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Rab26Q504M8 260 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gnb3Q61011 340 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Tbr1Q64336 681 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Zscan4cQ80VJ6 506 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ttc9cQ810A3 171 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Prr3Q811B5 190 aaKnown RBP7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Znf689Q8BKK5 500 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Mmp28Q8CGV8 520 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gsto2Q8K2Q2 248 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Defb36Q8K3U4 67 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Vmn1r37Q8R2E4 302 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Mettl21AQ9CQL0 218 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Atp5sQ9CRA7 200 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Wars2Q9CYK1 360 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Shisal2bQ9D1Y9 158 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ube2v2Q9D2M8 145 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Golt1aQ9DCQ3 133 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Acot2Q9QYR9 453 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Trex2Q9R1A9 236 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Igkv18-36A0A075B5M9 114 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm29049A0A087WSM5 227 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm10715J3QP74 227 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cdk5r2O35926 369 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 PlgP20918 812 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cd3eP22646 189 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Srp9P49962 86 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ccdc190Q3URK1 288 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Nupr2Q497P3 102 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm20816Q5FWD4 227 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Taar8bQ5QD06 344 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Sim2Q61079 657 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm20809Q62458 227 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Zfp759Q7M6X3 721 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ankrd33Q8BXP5 385 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Fam78aQ8C552 283 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm16223Q8CBM3 117 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 McatQ8R3F5 381 aaKnown RBP7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cbr4Q91VT4 236 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 RabifQ91X96 123 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Siglec5Q920G3 569 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Krcc1Q99JT5 256 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Il17bQ9QXT6 180 aa7.75□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Prr12E9PYL2 2035 aaKnown RBP7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Sirpb1bA0A0A6YXN8 397 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm42420A0A0J9YUQ2 99 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm17175E9Q528 179 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Sirpb1cK7N6K7 397 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr898L7N1Z5 316 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Hoxa5P09021 270 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Id1P20067 168 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Apoc3P33622 99 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Mapk14P47811 360 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 BckdhaP50136 442 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Rab5bP61021 215 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Atp6v0cP63082 155 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Proser1Q5PRE5 913 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Snap91Q61548 901 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Znf185Q62394 352 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 IgflQ6B9Z0 140 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gpr75Q6X632 540 aa7.74□□□□□ -1.17
Upf3b-201ENSMUST00000076265 AamdcQ8R0P4 122 aa7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms