RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Vax2Q9WTP9 292 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Folr1P35846 255 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Gpr183Q3U6B2 357 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Wfdc6aQ3UW55 136 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Fbll1Q80WS3 314 aaKnown RBP13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 F12Q80YC5 597 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Ube3dQ8BX13 368 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 FibinQ9CQS3 217 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Mpc2Q9D023 127 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Rhebl1Q9D8T3 184 aa13.13□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Esp6A8R0U0 136 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Muc3E9PWP7 378 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Gm10666K7N6B8 321 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Vmn1r121K7N6J4 314 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Rpl13aP19253 203 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Ly6dP35459 127 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 TprkbQ8QZZ7 175 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Chst11Q9JME2 352 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Hsd17b6Q9R092 317 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Tnrc6cQ3UHC0 1690 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Igkv17-121A0A0G2JFA8 117 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Gdf1P20863 357 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 SryQ05738 395 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 PilrbQ2YFS2 224 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Abhd3Q91ZH7 411 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Ighv15-2A0A0A6YX72 118 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Lgals3P16110 264 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Tbxa2rP30987 341 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Hist1h1dP43277 221 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 F7P70375 446 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Pafah1b2Q61206 229 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr645Q7TRQ1 315 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Cacfd1Q8BG21 171 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 PisdQ8BSF4 406 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 RhovQ8VDU1 236 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Tmem123Q91Z22 195 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Tppp3Q9CRB6 176 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Slc25a22Q9D6M3 323 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr951Q9EQ94 314 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Gm12117V9GXK0 151 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Ankrd29D3YVV3 309 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Vmn1r113G3UWI8 307 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Cd200O54901 278 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Hprt1P00493 218 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Ctf2P83714 204 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Obox7Q4KL20 218 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Serinc4Q5XK03 492 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Vmn1r193Q8R258 319 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr1233Q8VGN0 305 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Egln1Q91YE3 400 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 TsfmQ9CZR8 324 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 1700025F22RikQ9D9Y7 111 aa13.12□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Vmn1r27K7N688 303 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Thbs3Q05895 956 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Fam220aQ3ZN08 260 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Slc16a11Q5NC32 447 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr141Q60880 325 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Dusp23Q6NT99 150 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr994Q8VF73 314 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Gm8677K9J7G9 307 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Dusp1P28563 367 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Rnase11Q5GAM9 192 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Vmn1r195Q5SVD6 316 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr919Q8VF78 315 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr181Q8VGQ7 317 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Il24Q925S4 181 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Atp6v1fQ9D1K2 119 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Ergic1Q9DC16 290 aaKnown RBP13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Gpx2Q9JHC0 190 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Pom121l12A0A1B0GSJ4 278 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 CryabP23927 175 aaKnown RBP13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 DapQ91XC8 102 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Glipr2Q9CYL5 154 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Spsb1Q9D5L7 273 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 GlceQ9EPS3 618 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Fbxw27A0A1D5RLF0 466 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr250E9PV37 331 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 P01915 264 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Epdr1Q99M71 224 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Fdx2Q9CPW2 174 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Lamtor1Q9CQ22 161 aa13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 CsQ9CZU6 464 aaKnown RBP13.11□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Saxo1B1AXP3 476 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Zfp97E9PZP6 546 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Gm11168J3QN50 228 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Zfp960L7N267 546 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 AgrpP56473 131 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Siah2Q06986 325 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr138Q7TRI7 312 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Lrrtm3Q8BZ81 582 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 RabepkQ8VCH5 380 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr136Q8VG72 312 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Rpl7l1Q9D8M4 246 aaKnown RBP13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Pycr3Q9DCC4 274 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Trav10nA0A075B622 114 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Trav10A0A075B642 114 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Trav5-4A0A075B652 114 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 GmlE9PX31 176 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Olfr624F8VQI7 308 aa13.1□□□□□ -0.31
Pcdha1-201ENSMUST00000070797 Prss12O08762 761 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 79.6 ms