RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cxcl3Q6W5C0 100 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Actbl2Q8BFZ3 376 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Pom121Q8K3Z9 1200 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1102Q8VES2 324 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr976Q8VF15 326 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Trappc2Q9CQP2 140 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Tmem88Q9D0N8 159 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Snapc3Q9D2C9 407 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 S100a16Q9D708 124 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Mrpl39Q9JKF7 336 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Mmp24Q9R0S2 618 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Hnf4gQ9WUU6 408 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 AgrnA2ASQ1 1950 aa6.04□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Htra4A2RT60 483 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm43720E0CXM8 267 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm21812J3QN84 227 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 HpnO35453 436 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Cd5P13379 494 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 BlkP16277 499 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Lef1P27782 397 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gsx2P31316 305 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rab11bP46638 218 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Crabp1P62965 137 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Samd12Q0VE29 161 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Spata22Q5SV06 358 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Slc25a35Q5SWT3 300 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gp49aQ61450 303 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 OmgQ63912 440 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1299Q7TQX5 312 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Cmtm4Q8CJ61 208 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Zfp119bQ8K0G9 543 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Vmn1r226Q8R2A8 298 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr656Q8VGX9 329 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 HypmQ9CR04 117 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ppp1r35Q9D8C8 260 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ttc32Q9DAC7 148 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Aurkaip1Q9DCJ7 200 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Sfrp5Q9WU66 314 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Myo9bQ9QY06 2114 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 AtrQ9JKK8 2635 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr588-ps1A0A1B0GSZ2 313 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1410E9PYK6 323 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr773F6VS78 311 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm21834J3QN05 151 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Raet1aO08602 253 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Raet1bO08603 253 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Lhx8O35652 367 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 HexbP20060 536 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Icam2P35330 277 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gabrr1P56475 480 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rap1aP62835 184 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rab42Q0PD08 215 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Tle4Q62441 773 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Slc22a13Q6A4L0 551 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Zpld1Q8BGZ8 415 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 V1ra11Q8R2E6 318 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Abhd14bQ8VCR7 210 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr780Q8VEU0 312 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr772Q8VGC5 311 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rab40bQ8VHP8 278 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Vmn1r45Q8VIC7 318 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Plpp7Q91WB2 271 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Dusp7Q91Z46 422 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rap1bQ99JI6 184 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Tmem219Q9D123 240 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 9230110F15RikQ9D262 117 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr19Q9JHB2 309 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Slc35a2Q9R0M8 390 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Fnd3c2A2AP83 941 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1255A2AUA4 310 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Zcchc24B2RVL6 241 aaKnown RBP6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Vmn2r107E9PZJ7 861 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm3072F6SKY8 209 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rnase2bO35292 155 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 H2-Q10P01898 325 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Klk1b16P04071 261 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 SftpcP21841 193 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ceacam19Q3TQ88 271 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gpank1Q61858 372 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Lcn12Q6JVL5 193 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr688Q6W049 321 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1472Q7TQQ9 314 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr645Q7TRQ1 315 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr314Q7TRZ7 330 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 SelenoiQ80TA1 398 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Prss33Q80WM7 277 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rcc2Q8BK67 520 aaKnown RBP6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ppp1r3eQ8BRJ4 279 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm9999Q8C5Y2 53 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 A930004D18RikQ8C8W7 157 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr186Q8VEX5 309 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Scgb1b27Q91WB5 92 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Zbtb8aQ9CWH1 434 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Cnih4Q9CX13 139 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 St6galnac5Q9QYJ1 336 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Adh4Q9QYY9 377 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Dkkl1Q9QZL9 230 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Itpr3P70227 2670 aa6.03□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Mast4Q811L6 2618 aa6.02□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Dcst2A0A140LIJ0 701 aa6.02□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms