RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ltc4sQ60860 150 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vstm2lQ6PDS0 220 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1290Q7TQX8 312 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Fyttd1Q91Z49 317 aaKnown RBP10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Trav12-2A0N8N6 114 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ntn1O09118 604 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 P01798 113 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lgals3P16110 264 aaKnown RBP10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ankrd53Q3V0J4 497 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 PcnpQ6P8I4 178 aaKnown RBP10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tmem255aQ8BHW5 351 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gltpd2Q8K0R6 321 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 AhspQ9CY02 102 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Esp6A8R0U0 136 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm10799F7C7U2 104 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gfra3O35118 397 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Nkx2-1P50220 372 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gnb1P62874 340 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ppp1r14dQ7TT52 146 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Slc17a5Q8BN82 495 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Wdfy2Q8BUB4 400 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tmem205Q91XE8 189 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 NtmQ99PJ0 344 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 D930007J09RikQ9D2K6 131 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 CutcQ9D8X1 272 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ighv7-1A0A075B5S2 121 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1029A2ATE0 324 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Dpy19l1A6X919 746 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 LipiF6YQT7 476 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr194L7N1Y8 306 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 EndogO08600 294 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lin7cO88952 197 aaKnown RBP10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 GrprP21729 384 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Q3U595 105 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Rph3alQ768S4 302 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1216Q7TR05 311 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1131Q7TR45 309 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1028Q7TR89 324 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr775Q7TRI4 312 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Negr1Q80Z24 348 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r226Q8R2A8 298 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Seh1lQ8R2U0 360 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr554E9Q546 317 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1218L7MU54 311 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Cldn18P56857 264 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 G430049J08RikQ3TL09 166 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Il12rb1Q60837 738 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tdpoz5Q6YCH1 340 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Galnt6Q8C7U7 622 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gpx6Q91WR8 221 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Plpp6Q9D4F2 292 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 ApooQ9DCZ4 198 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gk2Q9WU65 554 aa10.47□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Cxxc4Q6NXI8 198 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr469Q8VF66 314 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Dnajb12Q9QYI4 376 aaKnown RBP10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Atg2aQ6P4T0 1914 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Btbd35f28A2CFD5 498 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ascl4M0QW46 144 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Degs1O09005 323 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Hmgb3O54879 200 aaKnown RBP10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gls2Q571F8 602 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Rhbdd1Q8BHC7 315 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 BmfQ91ZE9 185 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Smim23Q9DAL0 136 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ighv1-54A0A075B5W5 117 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1532-ps1A0A0R4J8U2 307 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr707K7N662 307 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 B3gnt6Q3USF0 391 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mef2aQ60929 498 aa10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 SlirpQ9D8T7 112 aaKnown RBP10.46□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Trav5-1A0A075B5Z7 114 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Arxes1C0HK79 180 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Arxes2C0HK80 180 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr544E9PX47 334 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr893K7N678 312 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 PtgfrP43117 366 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Bmp5P49003 452 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Cd7P50283 210 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm21093Q6GQS8 569 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1509Q7TQQ0 308 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Klk13Q8CGR6 276 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Trappc2Q9CQP2 140 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ap1s2Q9DB50 160 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Cnih1O35372 144 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm10840Q3V2K9 103 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Zfp30Q60585 533 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Rpl35Q6ZWV7 123 aaKnown RBP10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Zfp273Q7M6W8 501 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Zfp85Q7TMC9 473 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1281Q7TQY6 305 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Commd1Q8K4M5 188 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tceal3Q8R0A5 200 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1132Q8VG97 308 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Wdr77Q99J09 342 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Sgo1Q9CXH7 517 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Syt6Q9R0N8 511 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 ReckQ9Z0J1 971 aa10.46□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr911-ps1A0A140T8K0 311 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Prr32A2AFE9 284 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms