RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	WFDC12	Q8WWY7	111 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	RAB18	Q9NP72	206 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	FBLN5	Q9UBX5	448 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	TCF19	Q9Y242	345 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	RRP15	Q9Y3B9	282 aa	Known RBP	13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	LRRC42	Q9Y546	428 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	HILPDA	Q9Y5L2	63 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	C15orf65	H3BRN8	121 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	BUB1B-PAK6	H3BSN5	160 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455		H3BUI4	141 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	ORC5	O43913	435 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	ARL6IP5	O75915	188 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	HTR2C	P28335	458 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	KRTAP10-3	P60369	221 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	QRFP	P83859	136 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	RAB12	Q6IQ22	244 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	CD200R1L	Q6Q8B3	271 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	OR9G1	Q8NH87	305 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	RFESD	Q8TAC1	157 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	NDNF	Q8TB73	568 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	CREB3L1	Q96BA8	519 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	CST11	Q9H112	138 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	PEX16	Q9Y5Y5	336 aa		13.45	□□□□□ -0.26
CCND3-222	ENST00000612455	FAM172BP	A6NC97	362 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	TMEM14DP	A8MWL7	114 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	LEUTX	A8MZ59	168 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455		J3QR06	171 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	TOR1A	O14656	332 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	CHST1	O43916	411 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	CA11	O75493	328 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	JUNB	P17275	347 aa	Predicted RBP	13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	NFYB	P25208	207 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	RPS27A	P62979	156 aa	Known RBP	13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	PLA1A	Q53H76	456 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	UBE2U	Q5VVX9	321 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	SPART	Q8N0X7	666 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	OR52M1	Q8NGK5	317 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	OR6M1	Q8NGM8	313 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	KCNG3	Q8TAE7	436 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	CITED1	Q99966	193 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	TM2D1	Q9BX74	207 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	ZNF696	Q9H7X3	374 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	ABCB10	Q9NRK6	738 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	PITPNC1	Q9UKF7	332 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	PSG11	Q9UQ72	335 aa		13.44	□□□□□ -0.26
CCND3-222	ENST00000612455	TRRAP	Q9Y4A5	3859 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	OOSP1	A8MZH6	123 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	SLC17A2	O00624	439 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	PDCD6	O75340	191 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	MPIG6B	O95866	241 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	SSTR5	P35346	364 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	UNC119	Q13432	240 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	TPTE2P1	Q5T6R2	138 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	OR10K2	Q6IF99	312 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	SVOP	Q8N4V2	548 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	NEK7	Q8TDX7	302 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	FAM46B	Q96A09	425 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	MMP28	Q9H239	520 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	NDUFB11	Q9NX14	153 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	ETAA1	Q9NY74	926 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	AK6	Q9Y3D8	172 aa	Known RBP	13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	PKD1L1	Q8TDX9	2849 aa		13.43	□□□□□ -0.26
CCND3-222	ENST00000612455	TRDV1	A0A1B0GX56	115 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	AIP	O00170	330 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	F2RL2	O00254	374 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	BPNT1	O95861	308 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	GAL	P22466	123 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	CHAT	P28329	748 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	CEACAM3	P40198	252 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	LOXL3	P58215	753 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	SRSF4	Q08170	494 aa	Known RBP	13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	SYT6	Q5T7P8	510 aa	Predicted RBP	13.42	□□□□□ -0.26
CCND3-222	ENST00000612455		Q8N2B8	174 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	DTX3	Q8N9I9	347 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	CCDC107	Q8WV48	283 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	ARL11	Q969Q4	196 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	CYYR1	Q96J86	154 aa		13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	MBNL3	Q9NUK0	354 aa	Known RBP	13.42	□□□□□ -0.26
CCND3-222	ENST00000612455	TRAV1-2	A0A0B4J238	106 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	FAM90A9P	A6NNJ1	464 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	CALR	P27797	417 aa	Known RBP	13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	PSMD7	P51665	324 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	EFNB2	P52799	333 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455		Q3ZCU0	254 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	PRR31	Q5SQ13	230 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	OR2W3	Q7Z3T1	314 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	FAM89B	Q8N5H3	189 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	LINC00311	Q8N616	119 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	C8orf31	Q8N9H6	132 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	LEAP2	Q969E1	77 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	TMEM59	Q9BXS4	323 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	NPFFR1	Q9GZQ6	430 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455		V9GY05	133 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	NBEAL1	Q6ZS30	2694 aa		13.41	□□□□□ -0.26
CCND3-222	ENST00000612455	UBE2QL1	A1L167	161 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	C12orf77	C9JDV5	145 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	IGHV3-7	P01780	117 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	BRS3	P32247	399 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	LTC4S	Q16873	150 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms