RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 DOCK11Q5JSL3 2073 aa13.68□□□□□ -0.22
PMF1-206ENST00000606952 MEIKINA0A087WXM9 373 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 TRBV23-1A0A0A0MS06 115 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 SSX4O60224 188 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 CTXN2P0C2S0 81 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 CHRFAM7AQ494W8 412 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 ZNF660Q6AZW8 331 aaPredicted RBP13.67□□□□□ -0.22
PMF1-206ENST00000606952 NLRC3Q7RTR2 1065 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 LHFPL1Q86WI0 220 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 OR13A1Q8NGR1 328 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 C8orf46Q8TAG6 207 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 NECAP2Q9NVZ3 263 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 COPZ2Q9P299 210 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 LINC00312Q9Y6C7 94 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 CENPEQ02224 2701 aa13.67□□□□□ -0.22
PMF1-206ENST00000606952 KIAA2026Q5HYC2 2103 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 TACC2O95359 2948 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 IGKV1-6A0A0C4DH72 117 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 A8MXK9 166 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 DISC1C4P0D8 188 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 M0QYG6 137 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 GSTT2P0CG29 244 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 RPS2P15880 293 aaKnown RBP13.66□□□□□ -0.22
PMF1-206ENST00000606952 GZMHP20718 246 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 ARPC4P59998 168 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 EDDM3AQ14507 147 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 HERPUD1Q15011 391 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 DEFB113Q30KQ7 82 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 DHRS11Q6UWP2 260 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 NRARPQ7Z6K4 114 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 FAM168AQ92567 244 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 DMRTB1Q96MA1 342 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 SLC6A7Q99884 636 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 PRRT1Q99946 306 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 BPESC1Q9GZL8 116 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 TAS2R3Q9NYW6 316 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 KCNIP1Q9NZI2 227 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 PCDHB10Q9UN67 800 aa13.66□□□□□ -0.22
PMF1-206ENST00000606952 UBE2J1Q9Y385 318 aaPredicted RBP13.66□□□□□ -0.22
PMF1-206ENST00000606952 TRBV6-7A0A0A0MS04 114 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 LINC00854A0A1B0GVQ3 168 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 hADV38S2A0JD32 116 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 C12orf77C9JDV5 145 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 IGHV2-5P01817 119 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 PMP2P02689 132 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 FCER2P06734 321 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 SCTP09683 121 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 DNASE1P24855 282 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 OR3A3P47888 321 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 EDDM3BP56851 147 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 TMEM30BQ3MIR4 351 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 WDR25Q64LD2 544 aaPredicted RBP13.65□□□□□ -0.22
PMF1-206ENST00000606952 FAAP20Q6NZ36 180 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 CLEC2AQ6UVW9 174 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 TPRX1Q8N7U7 411 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 OR56B4Q8NH76 319 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 CCDC107Q8WV48 283 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 PIMREGQ9BSJ6 248 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 DCTN5Q9BTE1 182 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 TAF9BQ9HBM6 251 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 RAB9BQ9NP90 201 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 EHFQ9NZC4 300 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 SCP2D1Q9UJQ7 156 aa13.65□□□□□ -0.22
PMF1-206ENST00000606952 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 TRGV10A0A0A0MS01 117 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 ZNF729A6NN14 1252 aaPredicted RBP13.64□□□□□ -0.23
PMF1-206ENST00000606952 F2RL2O00254 374 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 TUSC2O75896 110 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 NDUFB6O95139 128 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 AMY2AP04746 511 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 OR5H8P0DN80 308 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 NDUFB7P17568 137 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 HTD2P86397 168 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 TMEM17Q86X19 198 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 CENPSQ8N2Z9 138 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 ZNF565Q8N9K5 539 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 OR51S1Q8NGJ8 323 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 ENKURQ8TC29 256 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 MRGPRDQ8TDS7 321 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 GIMAP1Q8WWP7 306 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 PERPQ96FX8 193 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 SLC25A21Q9BQT8 299 aaPredicted RBP13.64□□□□□ -0.23
PMF1-206ENST00000606952 DPAGT1Q9H3H5 408 aa13.64□□□□□ -0.23
PMF1-206ENST00000606952 ANKRD17O75179 2603 aaKnown RBP13.63□□□□□ -0.23
PMF1-206ENST00000606952 FAM240BA0A1B0GVZ2 78 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 HBZP02008 142 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 HEXAP06865 529 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 GLP1RP43220 463 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 RAG2P55895 527 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 LMO4P61968 165 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 RPL31P62899 125 aaKnown RBP13.63□□□□□ -0.23
PMF1-206ENST00000606952 RBMS2Q15434 407 aaKnown RBP13.63□□□□□ -0.23
PMF1-206ENST00000606952 CARTPTQ16568 116 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 C17orf58Q2M2W7 97 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 TRIM16LQ309B1 348 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 IGSF11Q5DX21 431 aa13.63□□□□□ -0.23
PMF1-206ENST00000606952 ZNF782Q6ZMW2 699 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms