RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 CHCHD6Q9BRQ6 235 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 ZNF286AQ9HBT8 521 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 SSR3Q9UNL2 185 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 PDCD5O14737 125 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 SOCS1O15524 211 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 FBP1P09467 338 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 MYL9P24844 172 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 TGFBR1P36897 503 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 EFNB2P52799 333 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 RBMS3Q6XE24 437 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 OR13D1Q8NGV5 346 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 MRPL30Q8TCC3 161 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 PIFOQ8TCI5 191 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 TAF15Q92804 592 aaKnown RBP eCLIP15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 CHIAQ9BZP6 476 aa15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 ZMAT3Q9HA38 289 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-221ENST00000599833 MCRIP1C9JLW8 97 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 TRIM77I1YAP6 450 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 CLEC2LP0C7M8 214 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 SLC2A2P11168 524 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 SDC2P34741 201 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 FAM53AQ6NSI3 398 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 C6orf201Q7Z4U5 140 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 C5orf24Q7Z6I8 188 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 MBNL3Q9NUK0 354 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 ETAA1Q9NY74 926 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 POMT1Q9Y6A1 747 aa15.79■□□□□ 0.12
SHKBP1-221ENST00000599833 UBE2QL1A1L167 161 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 FAM172BPA6NC97 362 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 ARG1P05089 322 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 TPRA1Q86W33 373 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 ZNF565Q8N9K5 539 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 OR13F1Q8NGS4 319 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 SSMEM1Q8WWF3 244 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 ZDHHC16Q969W1 377 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 CLEC7AQ9BXN2 247 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 LIN7BQ9HAP6 207 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 IDI2-AS1Q9NZ38 188 aa15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 TBL2Q9Y4P3 447 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-221ENST00000599833 NOTOA8MTQ0 251 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 C12orf77C9JDV5 145 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 LY6LH3BQJ8 138 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 ORC5O43913 435 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 CA11O75493 328 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 RCC1P18754 421 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 LOXL3P58215 753 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 RBM39Q14498 530 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 MOGAT2Q3SYC2 334 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 PLAC9Q5JTB6 97 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 ZNF880Q6PDB4 577 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 ABHD12Q8N2K0 398 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 OR4K15Q8NH41 348 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 RFESDQ8TAC1 157 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 CCDC107Q8WV48 283 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 KCTD7Q96MP8 289 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 FAAP24Q9BTP7 215 aa15.77■□□□□ 0.12
SHKBP1-221ENST00000599833 LOC100506127A0A0U1RQW1 187 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 TMEM89A2RUT3 159 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 VGLL3A8MV65 326 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 NAPSAO96009 420 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 GZMHP20718 246 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 RELBQ01201 579 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 AANATQ16613 207 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 NKAPLQ5M9Q1 402 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 OR52W1Q6IF63 320 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 C16orf87Q6PH81 154 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 GDPGP1Q6ZNW5 385 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 OR10A7Q8NGE5 316 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 UBALD1Q8TB05 177 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 NEK7Q8TDX7 302 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 HSF4Q9ULV5 492 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 KCNK7Q9Y2U2 307 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 FAM96BQ9Y3D0 163 aa15.76■□□□□ 0.11
SHKBP1-221ENST00000599833 RAB27BO00194 218 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 F2RL2O00254 374 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 RAB6AP20340 208 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 BLVRBP30043 206 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 COMPP49747 757 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 MINOS1Q5TGZ0 78 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 OLFML2AQ68BL7 652 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 SFXN4Q6P4A7 337 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 SPATA3Q8NHX4 192 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 ZNF596Q8TC21 504 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 LEAP2Q969E1 77 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 PTX4Q96A99 478 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 MALSU1Q96EH3 234 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 URM1Q9BTM9 101 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 TNFRSF19Q9NS68 423 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 RAB22AQ9UL26 194 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 MINOS1-NBL1R4GNA1 71 aa15.75■□□□□ 0.11
SHKBP1-221ENST00000599833 H3BUI4 141 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 TFAP2AP05549 437 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 HKR1P10072 659 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 VEGFCP49767 419 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 HLA-DRB5Q30154 266 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 FBLN7Q53RD9 439 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 SLC16A12Q6ZSM3 486 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 ARL11Q969Q4 196 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 ARHGAP5-AS1Q96IT6 56 aa15.74■□□□□ 0.11
SHKBP1-221ENST00000599833 NEDD4LQ96PU5 975 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms