RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 ARL11Q969Q4 196 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 SLC25A33Q9BSK2 321 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 SELENOIQ9C0D9 397 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 CCDC90BQ9GZT6 254 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 CST11Q9H112 138 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 RAB9BQ9NP90 201 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 SERTAD4Q9NUC0 356 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 ETAA1Q9NY74 926 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 RCC2Q9P258 522 aaKnown RBP11.73□□□□□ -0.53
XRCC1-208ENST00000598422 TRAPPC2LQ9UL33 140 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 PSG11Q9UQ72 335 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 TRRAPQ9Y4A5 3859 aa11.73□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 LY6LH3BQJ8 138 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 SDCBPO00560 298 aaPredicted RBP11.72□□□□□ -0.53
XRCC1-208ENST00000598422 RGS10O43665 173 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 OR2F2O95006 317 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM106CPP0CH98 169 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 HSMCR30P0CW71 290 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 MYF6P23409 242 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 SLC35A2P78381 396 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 INSL4Q14641 139 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 HSD17B12Q53GQ0 312 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 UTF1Q5T230 341 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 C6orf183Q5T699 404 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM27D1Q5T7N8 215 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 GLT8D1Q68CQ7 371 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 IZUMO2Q6UXV1 221 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 ZNF497Q6ZNH5 498 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 OR56B4Q8NH76 319 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 CFHR4Q92496 578 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 PHYHIPQ92561 330 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 SGCDQ92629 289 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 FAM46BQ96A09 425 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 ANKRD60Q9BZ19 345 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 GHRLQ9UBU3 117 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 PEX16Q9Y5Y5 336 aa11.72□□□□□ -0.53
XRCC1-208ENST00000598422 M0QZK8 103 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 SPINT2O43291 252 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 MT-ND4P03905 459 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 UBBP0CG47 229 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 IL3RAP26951 378 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 RAB7AP51149 207 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 HES1Q14469 280 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 TMEM95Q3KNT9 176 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 ABCA11PQ4W5N1 156 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 LIPKQ5VXJ0 399 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 CEACAM19Q7Z692 300 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 TMEM104Q8NE00 496 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 UBALD1Q8TB05 177 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 GNG12Q9UBI6 72 aa11.71□□□□□ -0.53
XRCC1-208ENST00000598422 LSM2Q9Y333 95 aaKnown RBP11.71□□□□□ -0.53
XRCC1-208ENST00000598422 A0A1W2PPE3 182 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 ORC5O43913 435 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 PDCD6O75340 191 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 CA11O75493 328 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 MPIG6BO95866 241 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 FUT3P21217 361 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 DEFA6Q01524 100 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 IRF3Q14653 427 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 NSUN5P1Q3KNT7 163 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 C9orf152Q5JTZ5 239 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 NKAPLQ5M9Q1 402 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 HIST2H2BDQ6DRA6 164 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 TRAT1Q6PIZ9 186 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 OR8H3Q8N146 312 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 PRR18Q8N4B5 295 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 DRAM1Q8N682 238 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 OR52M1Q8NGK5 317 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 TMEM203Q969S6 136 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 Q96M66 194 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 RBM14Q96PK6 669 aaKnown RBP11.7□□□□□ -0.54
XRCC1-208ENST00000598422 NEDD4LQ96PU5 975 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 DUSP21Q9H596 190 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 GFOD1Q9NXC2 390 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 BLOC1S6Q9UL45 172 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
XRCC1-208ENST00000598422 C15orf65H3BRN8 121 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 CCRL2O00421 344 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 HSD17B6O14756 317 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 WIPF1O43516 503 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 GLAP06280 429 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 SNRNP70P08621 437 aaKnown RBP11.69□□□□□ -0.54
XRCC1-208ENST00000598422 CD28P10747 220 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 TMEM11P17152 192 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 PSMA1P25786 263 aaKnown RBP11.69□□□□□ -0.54
XRCC1-208ENST00000598422 VHLP40337 213 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 TMEM30BQ3MIR4 351 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 SYT6Q5T7P8 510 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms