RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FAM189A2Q15884 450 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 HEPN1Q6WQI6 88 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 OR2W3Q7Z3T1 314 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 C6orf201Q7Z4U5 140 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 PRR18Q8N4B5 295 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 SETD6Q8TBK2 473 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM216AQ8WUB2 273 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 GCDHQ92947 438 aaPredicted RBP9.01□□□□□ -0.97
LIG1-211ENST00000596457 LEAP2Q969E1 77 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 ARL11Q969Q4 196 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 KCTD7Q96MP8 289 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 SULT4A1Q9BR01 284 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAAP24Q9BTP7 215 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 LPAR5Q9H1C0 372 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 DPAGT1Q9H3H5 408 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 ZNF286AQ9HBT8 521 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 CHMP1AQ9HD42 196 aaPredicted RBP9.01□□□□□ -0.97
LIG1-211ENST00000596457 PLEKHJ1Q9NW61 149 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 ZNRD1Q9P1U0 126 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 RCC2Q9P258 522 aaKnown RBP9.01□□□□□ -0.97
LIG1-211ENST00000596457 HILPDAQ9Y5L2 63 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 A0A0A6YYD4 124 aa9□□□□□ -0.97
LIG1-211ENST00000596457 IGHV3-43A0A0B4J1X8 118 aa9□□□□□ -0.97
LIG1-211ENST00000596457 IFITM5A6NNB3 132 aa9□□□□□ -0.97
LIG1-211ENST00000596457 H3BUI4 141 aa9□□□□□ -0.97
LIG1-211ENST00000596457 CRYBA1P05813 215 aa9□□□□□ -0.97
LIG1-211ENST00000596457 CGB3P0DN86 165 aa9□□□□□ -0.97
LIG1-211ENST00000596457 CGB7P0DN87 165 aa9□□□□□ -0.97
LIG1-211ENST00000596457 IGHV3-43DP0DP04 118 aa9□□□□□ -0.97
LIG1-211ENST00000596457 TGFBR1P36897 503 aa9□□□□□ -0.97
LIG1-211ENST00000596457 RANBP1P43487 201 aa9□□□□□ -0.97
LIG1-211ENST00000596457 GNG10P50151 68 aa9□□□□□ -0.97
LIG1-211ENST00000596457 SSX2Q16385 188 aa9□□□□□ -0.97
LIG1-211ENST00000596457 LY6EQ16553 131 aa9□□□□□ -0.97
LIG1-211ENST00000596457 TUSC1Q2TAM9 212 aa9□□□□□ -0.97
LIG1-211ENST00000596457 UTF1Q5T230 341 aa9□□□□□ -0.97
LIG1-211ENST00000596457 ZNF626Q68DY1 528 aa9□□□□□ -0.97
LIG1-211ENST00000596457 C16orf87Q6PH81 154 aa9□□□□□ -0.97
LIG1-211ENST00000596457 ZNF497Q6ZNH5 498 aa9□□□□□ -0.97
LIG1-211ENST00000596457 RTN4RL2Q86UN3 420 aa9□□□□□ -0.97
LIG1-211ENST00000596457 DYNAPQ8N1N2 210 aa9□□□□□ -0.97
LIG1-211ENST00000596457 OR11H6Q8NGC7 330 aa9□□□□□ -0.97
LIG1-211ENST00000596457 SSMEM1Q8WWF3 244 aa9□□□□□ -0.97
LIG1-211ENST00000596457 SSX3Q99909 188 aa9□□□□□ -0.97
LIG1-211ENST00000596457 CENPOQ9BU64 300 aa9□□□□□ -0.97
LIG1-211ENST00000596457 TM2D1Q9BX74 207 aa9□□□□□ -0.97
LIG1-211ENST00000596457 CHIAQ9BZP6 476 aa9□□□□□ -0.97
LIG1-211ENST00000596457 PRDM13Q9H4Q3 707 aa9□□□□□ -0.97
LIG1-211ENST00000596457 NCOR1P1Q9H4R4 102 aa9□□□□□ -0.97
LIG1-211ENST00000596457 ZMAT3Q9HA38 289 aaKnown RBP9□□□□□ -0.97
LIG1-211ENST00000596457 LIN7BQ9HAP6 207 aa9□□□□□ -0.97
LIG1-211ENST00000596457 DAPK2Q9UIK4 370 aa9□□□□□ -0.97
LIG1-211ENST00000596457 RAB22AQ9UL26 194 aa9□□□□□ -0.97
LIG1-211ENST00000596457 A0A075B6Q4 140 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 A0A1W2PPE3 182 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 FAM181BA6NEQ2 426 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 NOTOA8MTQ0 251 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 ODF3BA8MYP8 253 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 H3BUX3 64 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 AIREO43918 545 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 IL1AP01583 271 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 RNASE1P07998 156 aaKnown RBP8.99□□□□□ -0.97
LIG1-211ENST00000596457 JUNBP17275 347 aaPredicted RBP8.99□□□□□ -0.97
LIG1-211ENST00000596457 GZMHP20718 246 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 CHATP28329 748 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 RAB13P51153 203 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 EFNB2P52799 333 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 PRRX1P54821 245 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 TIMM50Q3ZCQ8 353 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 C12orf54Q6X4T0 127 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 Q6ZTK2 550 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 C5orf24Q7Z6I8 188 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 TPRA1Q86W33 373 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 NR2C2APQ86WQ0 139 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 LDLRAD3Q86YD5 345 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 BEND2Q8NDZ0 799 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 YIPF6Q96EC8 236 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 AJUBAQ96IF1 538 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 KIRREL1Q96J84 757 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 ABCB10Q9NRK6 738 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 KCNIP1Q9NZI2 227 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 TBL2Q9Y4P3 447 aaKnown RBP8.99□□□□□ -0.97
LIG1-211ENST00000596457 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
LIG1-211ENST00000596457 NOTCH1P46531 2555 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 SDCBPO00560 298 aaPredicted RBP8.98□□□□□ -0.97
LIG1-211ENST00000596457 SPINT2O43291 252 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 GLAP06280 429 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 SNRPBP14678 240 aaKnown RBP8.98□□□□□ -0.97
LIG1-211ENST00000596457 RCC1P18754 421 aaPredicted RBP8.98□□□□□ -0.97
LIG1-211ENST00000596457 HTR1DP28221 377 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 COMPP49747 757 aaPredicted RBP8.98□□□□□ -0.97
LIG1-211ENST00000596457 PAX5Q02548 391 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 LRRC75BQ2VPJ9 315 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 LDLRAD2Q5SZI1 272 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 C6orf183Q5T699 404 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 IDNKQ5T6J7 187 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 FAM53AQ6NSI3 398 aaPredicted RBP8.98□□□□□ -0.97
LIG1-211ENST00000596457 TMEM86BQ8N661 226 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 OR56B1Q8NGI3 324 aa8.98□□□□□ -0.97
LIG1-211ENST00000596457 OR1L1Q8NH94 360 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms