RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 WNK1Q9H4A3 2382 aa13.07□□□□□ -0.32
TRIM28-206ENST00000595974 A6NDX4 124 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 LEUTXA8MZ59 168 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 MCRIP1C9JLW8 97 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 ARL6IP5O75915 188 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 GZMHP20718 246 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 SSTR5P35346 364 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 MAP2K4P45985 399 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
TRIM28-206ENST00000595974 PRR31Q5SQ13 230 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 RAB12Q6IQ22 244 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 C11orf88Q6PI97 169 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 ZNF497Q6ZNH5 498 aa13.06□□□□□ -0.32
TRIM28-206ENST00000595974 AMMECR1Q9Y4X0 333 aaPredicted RBP13.06□□□□□ -0.32
TRIM28-206ENST00000595974 OOSP1A8MZH6 123 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 BUB1B-PAK6H3BSN5 160 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 AIPO00170 330 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 MRPS14O60783 128 aaKnown RBP13.05□□□□□ -0.32
TRIM28-206ENST00000595974 CA11O75493 328 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 GLAP06280 429 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 CD37P11049 281 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 KIR2DS4P43632 304 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 RAB13P51153 203 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 TMEM91Q6ZNR0 172 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 SLC16A12Q6ZSM3 486 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 OR6M1Q8NGM8 313 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 OR2T6Q8NHC8 308 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 MMP28Q9H239 520 aa13.05□□□□□ -0.32
TRIM28-206ENST00000595974 TRAV39A0A0B4J263 110 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 SLC22A1O15245 554 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 ORC5O43913 435 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 PDCD6O75340 191 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 MPIG6BO95866 241 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 MT-ND4P03905 459 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 JUNBP17275 347 aaPredicted RBP13.04□□□□□ -0.32
TRIM28-206ENST00000595974 FUT3P21217 361 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 HTR2CP28335 458 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 BRS3P32247 399 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 TPTE2P1Q5T6R2 138 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 CCDC144NLQ6NUI1 221 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 CCBE1Q6UXH8 406 aaPredicted RBP13.04□□□□□ -0.32
TRIM28-206ENST00000595974 TMEM219Q86XT9 240 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 GAPTQ8N292 157 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 SVOPQ8N4V2 548 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 RFESDQ8TAC1 157 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 FAM46BQ96A09 425 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 TMEM59Q9BXS4 323 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 RAB9BQ9NP90 201 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 ACOT13Q9NPJ3 140 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 ETAA1Q9NY74 926 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 PEX16Q9Y5Y5 336 aa13.04□□□□□ -0.32
TRIM28-206ENST00000595974 TET2Q6N021 2002 aaPredicted RBP13.03□□□□□ -0.32
TRIM28-206ENST00000595974 LY6LH3BQJ8 138 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 C15orf65H3BRN8 121 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 J3QR06 171 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 DENRO43583 198 aaKnown RBP13.03□□□□□ -0.32
TRIM28-206ENST00000595974 VSIG8P0DPA2 414 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 EFNB2P52799 333 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 FABP5Q01469 135 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 SRSF4Q08170 494 aaKnown RBP13.03□□□□□ -0.32
TRIM28-206ENST00000595974 LTC4SQ16873 150 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 TMEM30BQ3MIR4 351 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 UTF1Q5T230 341 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 SIGIRRQ6IA17 410 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 TRAT1Q6PIZ9 186 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 C16orf82Q7Z2V1 217 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 OR52M1Q8NGK5 317 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 KCNG3Q8TAE7 436 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 ARL11Q969Q4 196 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 PSG11Q9UQ72 335 aa13.03□□□□□ -0.32
TRIM28-206ENST00000595974 PKD1L1Q8TDX9 2849 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 TIMM23O14925 209 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 BPNT1O95861 308 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.33
TRIM28-206ENST00000595974 MNDAP41218 407 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 KRTAP10-3P60369 221 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 RPS27AP62979 156 aaKnown RBP13.02□□□□□ -0.33
TRIM28-206ENST00000595974 C6orf183Q5T699 404 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 Q8N2B8 174 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 CCDC107Q8WV48 283 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 LEAP2Q969E1 77 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 TOMM40LQ969M1 308 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 RPEQ96AT9 228 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 YTHDF1Q9BYJ9 559 aaKnown RBP13.02□□□□□ -0.33
TRIM28-206ENST00000595974 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 PLGRKTQ9HBL7 147 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 NDUFB11Q9NX14 153 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 TRAPPC2LQ9UL33 140 aa13.02□□□□□ -0.33
TRIM28-206ENST00000595974 TMEM14DPA8MWL7 114 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 SDCBPO00560 298 aaPredicted RBP13.01□□□□□ -0.33
TRIM28-206ENST00000595974 SLC17A2O00624 439 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 CHATP28329 748 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 RANBP1P43487 201 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 GNG10P50151 68 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
TRIM28-206ENST00000595974 UNC119Q13432 240 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 MADCAM1Q13477 382 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 SSX1Q16384 188 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 Q3ZCU0 254 aa13.01□□□□□ -0.33
TRIM28-206ENST00000595974 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms