RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 LY6G6FQ5SQ64 297 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 C12orf45Q8N5I9 185 aaPredicted RBP16.36■□□□□ 0.21
LSM4-203ENST00000593829 TMEM106AQ96A25 262 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 TMEM138Q9NPI0 162 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 PCDHB16Q9NRJ7 776 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.35■□□□□ 0.21
LSM4-203ENST00000593829 J3QT63 122 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 MAS1P04201 325 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 DVL1P1P54792 670 aaPredicted RBP16.35■□□□□ 0.21
LSM4-203ENST00000593829 UQCC3Q6UW78 93 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 FAM90A1Q86YD7 464 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 OR5D14Q8NGL3 314 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 BORCS8Q96FH0 119 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 NEIL1Q96FI4 390 aaPredicted RBP16.35■□□□□ 0.21
LSM4-203ENST00000593829 KCNK7Q9Y2U2 307 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 HIVEP2P31629 2446 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 ABCA2Q9BZC7 2435 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 TRAV18A0A075B6X5 111 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 IGHV3OR15-7A0A075B7D8 119 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 A0A0A6YYH2 397 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 IGKV1-9A0A0C4DH69 117 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 A6NJ64 397 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 INAFM1C9JVW0 142 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 H2AFB1P0C5Y9 115 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 HLA-GP17693 338 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 POU3F4P49335 361 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 RAB11BQ15907 218 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 C4orf46Q504U0 113 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 C11orf88Q6PI97 169 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 OR51D1Q8NGF3 324 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 OR8B3Q8NGG8 313 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 TMEM186Q96B77 213 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 SPSB1Q96BD6 273 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 OR8B2Q96RD0 313 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 PKIBQ9C010 78 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 HIF1ANQ9NWT6 349 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 POLDIP2Q9Y2S7 368 aa16.35■□□□□ 0.21
LSM4-203ENST00000593829 TRAV20A0A0B4J274 112 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 FOXH1O75593 365 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 SPDEFO95238 335 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 CD3DP04234 171 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 CD2P06729 351 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 OR4E1P0C645 316 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 EFNB2P52799 333 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 LYPD2Q6UXB3 125 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 ZNF546Q86UE3 836 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 ANGPTL5Q86XS5 388 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 OR5M8Q8NGP6 311 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 OR13C9Q8NGT0 318 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 FAM3DQ96BQ1 224 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 WDR13Q9H1Z4 485 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 DNAJB11Q9UBS4 358 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 PRELID3BQ9Y3B1 194 aa16.34■□□□□ 0.21
LSM4-203ENST00000593829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.33■□□□□ 0.218e-7■■■■■ 27.2
LSM4-203ENST00000593829 IGKV1-27A0A075B6S5 117 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 TMEM82A0PJX8 343 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 TNFRSF13BO14836 293 aaPredicted RBP16.33■□□□□ 0.21
LSM4-203ENST00000593829 SYNGR1O43759 233 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 GYPAP02724 150 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 GLRA1P23415 457 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 MPZP25189 248 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 RBP2P50120 134 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 ATP1B3P54709 279 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 CTAG1AP78358 180 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 LCN2P80188 198 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 GUCA2AQ02747 115 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 C2orf76Q3KRA6 126 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 ATRAIDQ6UW56 229 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 CALHM1Q8IU99 346 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 LINC00518Q8N0U6 118 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 OR10K1Q8NGX5 313 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 SEH1LQ96EE3 360 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 TMEM160Q9NX00 188 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 TNFSF18Q9UNG2 199 aa16.33■□□□□ 0.21
LSM4-203ENST00000593829 BCL2L11O43521 198 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 APOC3P02656 99 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 CD74P04233 296 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 MTCP1P56278 107 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 UBE2MP61081 183 aaKnown RBP16.33■□□□□ 0.2
LSM4-203ENST00000593829 IL24Q13007 206 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 GLT8D1Q68CQ7 371 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 LHFPL2Q6ZUX7 228 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 POC1AQ8NBT0 407 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 CHST6Q9GZX3 395 aa16.33■□□□□ 0.2
LSM4-203ENST00000593829 NSD1Q96L73 2696 aaPredicted RBP16.32■□□□□ 0.2
LSM4-203ENST00000593829 ADAM20O43506 726 aa16.32■□□□□ 0.2
LSM4-203ENST00000593829 PGA5P0DJD9 388 aa16.32■□□□□ 0.2
LSM4-203ENST00000593829 ZFP36P26651 326 aaKnown RBP16.32■□□□□ 0.2
LSM4-203ENST00000593829 SLC25A28Q96A46 364 aa16.32■□□□□ 0.2
LSM4-203ENST00000593829 SSBP3Q9BWW4 388 aaPredicted RBP16.32■□□□□ 0.2
LSM4-203ENST00000593829 MALRD1Q5VYJ5 2156 aa16.32■□□□□ 0.2
LSM4-203ENST00000593829 KANTRA0A1W2PQU2 76 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 RAB19A4D1S5 217 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 TEX46H3BTG2 121 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 RAB3DO95716 219 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 ACAA1P09110 424 aaPredicted RBP16.31■□□□□ 0.2
LSM4-203ENST00000593829 PRKACAP17612 351 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 GNB2P62879 340 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 MARC2Q969Z3 335 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 KAAG1Q9UBP8 84 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms