RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 CFPP27918 469 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 PSMB9P28065 219 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 DYNLT3P51808 116 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 RAB11BQ15907 218 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 TRAT1Q6PIZ9 186 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 OR2W3Q7Z3T1 314 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 MRGPRDQ8TDS7 321 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 KIRREL1Q96J84 757 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 NEDD4LQ96PU5 975 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 DPM3Q9P2X0 92 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 PITPNC1Q9UKF7 332 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 AMMECR1Q9Y4X0 333 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-221ENST00000589538 V9GY05 133 aa13.3□□□□□ -0.28
DNMT1-221ENST00000589538 LEUTXA8MZ59 168 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 ORC5O43913 435 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 IGLV1-47P01700 117 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 MT-ND4P03905 459 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 ARSBP15848 533 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 RPS27AP62979 156 aaKnown RBP13.29□□□□□ -0.28
DNMT1-221ENST00000589538 FAM189A2Q15884 450 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 SSX2Q16385 188 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 TMEM30BQ3MIR4 351 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 C6orf183Q5T699 404 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 BRICD5Q6PL45 260 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 OR52M1Q8NGK5 317 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 OR4P4Q8NGL7 312 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 OR9G1Q8NH87 305 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 URM1Q9BTM9 101 aaKnown RBP13.29□□□□□ -0.28
DNMT1-221ENST00000589538 ZNF747Q9BV97 191 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 TRAPPC2LQ9UL33 140 aa13.29□□□□□ -0.28
DNMT1-221ENST00000589538 AK6Q9Y3D8 172 aaKnown RBP13.29□□□□□ -0.28
DNMT1-221ENST00000589538 TMEM14DPA8MWL7 114 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 OOSP1A8MZH6 123 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 GDNFP39905 211 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 HLA-DRB5Q30154 266 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 CCDC144NLQ6NUI1 221 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 GAPTQ8N292 157 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 TM2D1Q9BX74 207 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 ZNF286AQ9HBT8 521 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 FBLN5Q9UBX5 448 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 HILPDAQ9Y5L2 63 aa13.28□□□□□ -0.28
DNMT1-221ENST00000589538 CLPSL1A2RUU4 121 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 SPINT2O43291 252 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 MDKP21741 143 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-221ENST00000589538 FGF9P31371 208 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-221ENST00000589538 SSTR5P35346 364 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 QRFPP83859 136 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 UNC119Q13432 240 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 P2RY14Q15391 338 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 SYT6Q5T7P8 510 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-221ENST00000589538 OLFML2AQ68BL7 652 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 SIGIRRQ6IA17 410 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 SHISA2Q6UWI4 295 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 BAIAP2L2Q6UXY1 529 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 ZNF554Q86TJ5 538 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 DYNAPQ8N1N2 210 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 RFESDQ8TAC1 157 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 ARL11Q969Q4 196 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 GFI1Q99684 422 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 MMP28Q9H239 520 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 STEAP1Q9UHE8 339 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 STUB1Q9UNE7 303 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 TENM1Q9UKZ4 2725 aa13.27□□□□□ -0.29
DNMT1-221ENST00000589538 FAM172BPA6NC97 362 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 BUB1B-PAK6H3BSN5 160 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 J3QR06 171 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 F2RL2O00254 374 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 TSPAN9O75954 239 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 TNFAIP8O95379 198 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 CHATP28329 748 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 BRS3P32247 399 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 RELBQ01201 579 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 LY6EQ16553 131 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 Q3ZCU0 254 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 LDLRAD2Q5SZI1 272 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 OR10K2Q6IF99 312 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 PIFOQ8TCI5 191 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 CCDC107Q8WV48 283 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 FAM3DQ96BQ1 224 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 C16orf95Q9H693 158 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 RANBP3Q9H6Z4 567 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-221ENST00000589538 KCNIP1Q9NZI2 227 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 SSR3Q9UNL2 185 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 TCF19Q9Y242 345 aa13.26□□□□□ -0.29
DNMT1-221ENST00000589538 DNHD1Q96M86 4753 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 TRAV39A0A0B4J263 110 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 UBE2QL1A1L167 161 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 C15orf65H3BRN8 121 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 RRP9O43818 475 aaKnown RBP13.25□□□□□ -0.29
DNMT1-221ENST00000589538 RAB3BP20337 219 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 PAX6P26367 422 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 BLVRBP30043 206 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-221ENST00000589538 MNDAP41218 407 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 PLA1AQ53H76 456 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 NKAPLQ5M9Q1 402 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 TPTE2P1Q5T6R2 138 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 C22orf42Q6IC83 251 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 OR51D1Q8NGF3 324 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 OR4C13Q8NGP0 309 aa13.25□□□□□ -0.29
DNMT1-221ENST00000589538 NPFFR1Q9GZQ6 430 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms