RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ZNF737O75373 536 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 CLPXO76031 633 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 IGHV3-7P01780 117 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 CSF1P09603 554 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 GABRB1P18505 474 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 CDK2P24941 298 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 DCKP27707 260 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 PTGFRP43088 359 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 GLP1RP43220 463 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 OR3A1P47881 315 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 GLIPR1P48060 266 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 ETV1P50549 477 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 P2RX3P56373 397 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 ISL1P61371 349 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 DEFA6Q01524 100 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 IL18R1Q13478 541 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 HIST2H2BDQ6DRA6 164 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 OR52W1Q6IF63 320 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 Q6ZSR3 168 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 RNF144BQ7Z419 303 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 ABHD12Q8N2K0 398 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 STX19Q8N4C7 294 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 ZFP41Q8N8Y5 198 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 ZNF565Q8N9K5 539 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 HAVCR2Q8TDQ0 301 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 MALSU1Q96EH3 234 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 TMEM80Q96HE8 168 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 CLEC7AQ9BXN2 247 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 TMEM133Q9H2Q1 129 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 PITPNC1Q9UKF7 332 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 FOXJ3Q9UPW0 622 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 EXOSC1Q9Y3B2 195 aaKnown RBP6.64□□□□□ -1.35
DNMT1-219ENST00000589349 TBL2Q9Y4P3 447 aaKnown RBP6.64□□□□□ -1.35
DNMT1-219ENST00000589349 LINC00312Q9Y6C7 94 aa6.64□□□□□ -1.35
DNMT1-219ENST00000589349 IGHV2-26A0A0B4J1V2 119 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 IGKV1-12A0A0C4DH73 117 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 A0A0G2JK05 382 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 A0A1W2PPK0 400 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 AP4M1O00189 453 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 KDM4BO94953 1096 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 CDRT1O95170 752 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 IGKV1D-12P01611 117 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 BTF3P20290 206 aaKnown RBP6.63□□□□□ -1.35
DNMT1-219ENST00000589349 SERPINA2P20848 420 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 CD24P25063 80 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 HTR1DP28221 377 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 BRS3P32247 399 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 OR3A4PP47883 348 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 PRRX1P54821 245 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 TIRAPP58753 221 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 ZNF146Q15072 292 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 C2orf68Q2NKX9 166 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 NSUN5P1Q3KNT7 163 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 C9orf152Q5JTZ5 239 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 ATAD3CQ5T2N8 411 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 DDI2Q5TDH0 399 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 ASPHD2Q6ICH7 369 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 RPL22L1Q6P5R6 122 aaKnown RBP6.63□□□□□ -1.35
DNMT1-219ENST00000589349 SAXO1Q8IYX7 474 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 C8orf59Q8N0T1 100 aaPredicted RBP6.63□□□□□ -1.35
DNMT1-219ENST00000589349 LYG1Q8N1E2 194 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 JAGN1Q8N5M9 183 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 KLHDC1Q8N7A1 406 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 BPIFB6Q8NFQ5 453 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 APH1BQ8WW43 257 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 TMEM106AQ96A25 262 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 RDH12Q96NR8 316 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 PRR25Q96S07 402 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 THAP7Q9BT49 309 aaPredicted RBP6.63□□□□□ -1.35
DNMT1-219ENST00000589349 BARHL1Q9BZE3 327 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 METTL9Q9H1A3 318 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 C16orf95Q9H693 158 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 BABAM2Q9NXR7 383 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 CLEC2DQ9UHP7 191 aa6.63□□□□□ -1.35
DNMT1-219ENST00000589349 UBE2J1Q9Y385 318 aaPredicted RBP6.63□□□□□ -1.35
DNMT1-219ENST00000589349 ODAMA1E959 279 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 LEUTXA8MZ59 168 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 SLC33A1O00400 549 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-219ENST00000589349 MYL12BO14950 172 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 WBP4O75554 376 aaKnown RBP6.62□□□□□ -1.35
DNMT1-219ENST00000589349 MMP23AO75900 390 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 TSPAN9O75954 239 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 OR7C1O76099 320 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-219ENST00000589349 RBP4P02753 201 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 MT-ND2P03891 347 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 LIMS3P0CW19 117 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 LIMS4P0CW20 117 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 C21orf33P30042 268 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-219ENST00000589349 BDKRB2P30411 391 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 ZNF93P35789 620 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-219ENST00000589349 CEACAM3P40198 252 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 MNDAP41218 407 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 GNG10P50151 68 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 DLX6P56179 175 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 KRTAP10-3P60369 221 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 ST3GAL4Q11206 333 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 HES1Q14469 280 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 HERPUD1Q15011 391 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 CDK5R1Q15078 307 aa6.62□□□□□ -1.35
DNMT1-219ENST00000589349 PIGYQ3MUY2 71 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms