RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 NR2C2APQ86WQ0 139 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 TMEM104Q8NE00 496 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 OR13F1Q8NGS4 319 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 GCDHQ92947 438 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 FAM46BQ96A09 425 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 RIMS4Q9H426 269 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 BANF2Q9H503 90 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 CALYQ9NYX4 217 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 STEAP1Q9UHE8 339 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 VPREB3Q9UKI3 123 aa11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-202ENST00000585540 MXRA5Q9NR99 2828 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 CUBNO60494 3623 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 AIPO00170 330 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 AIREO43918 545 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 TFAP2AP05549 437 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 COX7A1P24310 79 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 ALDH3B2P48448 385 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 LSM3P62310 102 aaKnown RBP11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 PDZD9Q8IXQ8 264 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 OR9G1Q8NH87 305 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 PLPPR1Q8TBJ4 325 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 PTX4Q96A99 478 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 KCTD7Q96MP8 289 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 FUNDC2Q9BWH2 189 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 PITPNC1Q9UKF7 332 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 MGAT4AQ9UM21 535 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 PEX16Q9Y5Y5 336 aa11.23□□□□□ -0.61
PRKCSH-202ENST00000585540 MDFIC2A0A1B0GVS7 189 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 SCGNO76038 276 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 NDUFA7O95182 113 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 CLEC2LP0C7M8 214 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 RAB6AP20340 208 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 HTR1DP28221 377 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 CHATP28329 748 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 SDC2P34741 201 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 QRFPP83859 136 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 MXD1Q05195 221 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 UNC119Q13432 240 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 C17orf58Q2M2W7 97 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 C8orf31Q8N9H6 132 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 OR56B1Q8NGI3 324 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 OR13A1Q8NGR1 328 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 OR4F5Q8NH21 305 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 FAM3DQ96BQ1 224 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 KIRREL1Q96J84 757 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 CYYR1Q96J86 154 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 NAA50Q9GZZ1 169 aaKnown RBP11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 MBNL3Q9NUK0 354 aaKnown RBP11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 DPM3Q9P2X0 92 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 HSF4Q9ULV5 492 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 MMP24Q9Y5R2 645 aa11.22□□□□□ -0.61
PRKCSH-202ENST00000585540 A0A0B4J203 849 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 MEX3AA1L020 520 aaKnown RBP11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 IFITM5A6NNB3 132 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 NOTOA8MTQ0 251 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 LEUTXA8MZ59 168 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 TOR1AO14656 332 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 SPINT2O43291 252 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 IGLV1-47P01700 117 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 MT-ND4P03905 459 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 DYNC1I2Q13409 638 aaKnown RBP11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 HLA-DRB5Q30154 266 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 PRAMEF5Q5TYX0 476 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 OR51D1Q8NGF3 324 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 MRGPRDQ8TDS7 321 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 RANBP3Q9H6Z4 567 aaPredicted RBP11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 ABCB10Q9NRK6 738 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 KCNIP1Q9NZI2 227 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 RAB22AQ9UL26 194 aa11.21□□□□□ -0.61
PRKCSH-202ENST00000585540 KIAA2026Q5HYC2 2103 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 TRBV6-6A0A0A6YYG2 114 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 METTL21EPA6NDL7 271 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 F2RL2O00254 374 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 LPLP06858 475 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 SLC2A2P11168 524 aaPredicted RBP11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 NCS1P62166 190 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 PLA2G7Q13093 441 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 SIGIRRQ6IA17 410 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 C16orf82Q7Z2V1 217 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 CROCCP3Q8IVE0 287 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 OR4P4Q8NGL7 312 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 SSX3Q99909 188 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 NICN1Q9BSH3 213 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 LPAR5Q9H1C0 372 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 MMP28Q9H239 520 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms