RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MS4A15Q8N5U1 240 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 PARP16Q8N5Y8 322 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 OR8U1Q8NH10 309 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 FCGR1BQ92637 280 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 THRSPQ92748 146 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 UFD1Q92890 307 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 OPALINQ96PE5 141 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 MGLLQ99685 303 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 SEBOXQ9HB31 216 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF286AQ9HBT8 521 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 TAS2R3Q9NYW6 316 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 SCOCQ9UIL1 159 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 DNAH1Q9P2D7 4330 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 DNAH7Q8WXX0 4024 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FUOMA2VDF0 154 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A18PA6NE21 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A16PA6NEW6 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A20PA6NIJ5 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A9PA6NNJ1 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A12PA8MX19 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A5PA8MXJ8 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A15PP0C7V4 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A13PP0C7W8 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A14PP0C7W9 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FAM90A24PP0C7X0 464 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 CPEP16870 476 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 TMEM11P17152 192 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 CD34P28906 385 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 GDNFP39905 211 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 FUT6P51993 359 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 RPS11P62280 158 aaKnown RBP eCLIP9.67□□□□□ -0.86
TOP3A-215ENST00000583328 HNF4GQ14541 408 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 KIR2DS1Q14954 304 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 UBE2V2Q15819 145 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF260Q3ZCT1 412 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 Q499Y3 187 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 UBE2UQ5VVX9 321 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 LIPKQ5VXJ0 399 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 SERPINA12Q8IW75 414 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 STPG2Q8N412 459 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 C5orf56Q8N8D9 126 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 OR4D6Q8NGJ1 314 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 OR13C5Q8NGS8 318 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 TMEM106AQ96A25 262 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 RPEQ96AT9 228 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 NR1H4Q96RI1 486 aaPredicted RBP9.67□□□□□ -0.86
TOP3A-215ENST00000583328 PCDHB16Q9NRJ7 776 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 IL36RNQ9UBH0 155 aa9.67□□□□□ -0.86
TOP3A-215ENST00000583328 IGKV1-27A0A075B6S5 117 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 A0A087WXM4 84 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 SIRPB1O00241 398 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 FGF16O43320 207 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 IGHG2P01859 326 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
TOP3A-215ENST00000583328 CALCBP10092 127 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 ATF1P18846 271 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 PRKACBP22694 351 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 MAPK3P27361 379 aaPredicted RBP9.66□□□□□ -0.86
TOP3A-215ENST00000583328 OR3A1P47881 315 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 SOX2P48431 317 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 SNU13P55769 128 aaKnown RBP9.66□□□□□ -0.86
TOP3A-215ENST00000583328 TRAM1Q15629 374 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 PNLIPRP3Q17RR3 467 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 CXorf66Q5JRM2 361 aaPredicted RBP9.66□□□□□ -0.86
TOP3A-215ENST00000583328 Q8IYB0 196 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 FAM58AQ8N1B3 248 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 DRAM1Q8N682 238 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 DNAAF1Q8NEP3 725 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 TSPAN14Q8NG11 270 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 OR5D14Q8NGL3 314 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 OR13C9Q8NGT0 318 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 OR56B4Q8NH76 319 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 CORO2AQ92828 525 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 TOMM40LQ969M1 308 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 SPSB1Q96BD6 273 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 BORCS8Q96FH0 119 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 OR14A2Q96R54 314 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 ZCCHC4Q9H5U6 513 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 ZMAT4Q9H898 229 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 NEK6Q9HC98 313 aa9.66□□□□□ -0.86
TOP3A-215ENST00000583328 IGKV1-9A0A0C4DH69 117 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 SULT1B1O43704 296 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 CYB5AP00167 134 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 OCMP0CE72 109 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-215ENST00000583328 PRKACAP17612 351 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 NFYBP25208 207 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 PSMA1P25786 263 aaKnown RBP9.65□□□□□ -0.86
TOP3A-215ENST00000583328 PSMB9P28065 219 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 PTGFRP43088 359 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 CDX1P47902 265 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-215ENST00000583328 GLIPR1P48060 266 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 AESQ08117 197 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF146Q15072 292 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF529Q6P280 563 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 OVCH2Q7RTZ1 564 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 DERL3Q96Q80 235 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 TMED9Q9BVK6 235 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 VCX3AQ9NNX9 186 aa9.65□□□□□ -0.86
TOP3A-215ENST00000583328 RBFOX1Q9NWB1 397 aaKnown RBP9.65□□□□□ -0.86
TOP3A-215ENST00000583328 ING3Q9NXR8 418 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms