RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 MRPL52Q86TS9 123 aaKnown RBP2.36□□□□□ -2.03
SMARCE1-219ENST00000583294 ACBD4Q8NC06 268 aa2.36□□□□□ -2.03
SMARCE1-219ENST00000583294 SERPINB11Q96P15 392 aa2.36□□□□□ -2.03
SMARCE1-219ENST00000583294 PRSS27Q9BQR3 290 aa2.36□□□□□ -2.03
SMARCE1-219ENST00000583294 BCL2L14Q9BZR8 327 aa2.36□□□□□ -2.03
SMARCE1-219ENST00000583294 LCTP09848 1927 aa2.36□□□□□ -2.03
SMARCE1-219ENST00000583294 MYO9BQ13459 2157 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 ZNF879B4DU55 563 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 TMEM250H0YL14 139 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 FUSP35637 526 aaKnown RBP eCLIP2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 TSPAN31Q12999 210 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 RAB31Q13636 194 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 ZNF181Q2M3W8 571 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 TCF24Q7RTU0 167 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 NIT1Q86X76 327 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 TMEM25Q86YD3 366 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 C19orf60Q96EN9 201 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 ARAP3Q8WWN8 1544 aa2.35□□□□□ -2.03
SMARCE1-219ENST00000583294 A0A1B0GX12 115 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 SULT1C2O00338 296 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 EPPINO95925 133 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 CRABP1P29762 137 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 MAGEA6P43360 314 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 KCNJ3P48549 501 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 HADHBP55084 474 aaKnown RBP2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 OR8K1Q8NGG5 319 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 OR5C1Q8NGR4 320 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 CCDC127Q96BQ5 260 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 DDIT4LQ96D03 193 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 CACNA1SQ13698 1873 aa2.34□□□□□ -2.03
SMARCE1-219ENST00000583294 SYNRGQ9UMZ2 1314 aa2.34□□□□□ -2.04
SMARCE1-219ENST00000583294 FBN1P35555 2871 aaKnown RBP2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 MYO15BQ96JP2 1530 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 TP53I11O14683 189 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 SLC25A20O43772 301 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 DEDDO75618 318 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 SOX14O95416 240 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 FADS2O95864 444 aaKnown RBP2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 GZMHP20718 246 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 GABRA3P34903 492 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 PSMD8P48556 350 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 INPP1P49441 399 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 OR2B6P58173 313 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 PSG4Q00888 419 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 HES3Q5TGS1 186 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 TCAIMQ8N3R3 496 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 OR2V1Q8NHB1 315 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 DTD1Q8TEA8 209 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 CYTH2Q99418 400 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 OR51E2Q9H255 320 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 LRRC19Q9H756 370 aa2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 METTL17Q9H7H0 456 aaPredicted RBP2.33□□□□□ -2.04
SMARCE1-219ENST00000583294 CACNA1GO43497 2377 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 SHANK3Q9BYB0 1731 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 CRTAPO75718 401 aaPredicted RBP2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 CDK14O94921 469 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 LTAP01374 205 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 ATF1P18846 271 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 UGT2B10P36537 528 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 DEFA6Q01524 100 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 SKP2Q13309 424 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 ZNF322Q6U7Q0 402 aaPredicted RBP2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 COPS6Q7L5N1 327 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 OR11L1Q8NGX0 322 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 DMAC2Q9NW81 257 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 TAS2R9Q9NYW1 312 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 ZNF337Q9Y3M9 751 aa2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 ZNF638Q14966 1978 aaKnown RBP2.32□□□□□ -2.04
SMARCE1-219ENST00000583294 BAHCC1Q9P281 2608 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 IGKV1-12A0A0C4DH73 117 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 EFCAB9A8MZ26 197 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 F5H5T6 163 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 K7EQS6 105 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 GPR171O14626 319 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 TOR1AO14656 332 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 IGKV1D-12P01611 117 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 SLC35E2BP0CK96 405 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 NQO2P16083 231 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 CSRP1P21291 193 aaKnown RBP2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 RCVRNP35243 200 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 ACTR1BP42025 376 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 OR4D1Q15615 310 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 ZNF567Q8N184 647 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 SPERTQ8NA61 448 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 OR5D18Q8NGL1 313 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 OR9I1Q8NGQ6 314 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 ZNRF2Q8NHG8 242 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 TUBA4BQ9H853 241 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 ZNF286AQ9HBT8 521 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 VPREB3Q9UKI3 123 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 RAB3GAP2Q9H2M9 1393 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 CEP170Q5SW79 1584 aa2.31□□□□□ -2.04
SMARCE1-219ENST00000583294 IGHV3OR15-7A0A075B7D8 119 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 C17orf98A8MV24 154 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 B4DEV8 164 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 J3QLI3 93 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 RAB36O95755 333 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 GP1BAP07359 652 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 PSMA1P25786 263 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms