RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 OR4K15Q8NH41 348 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 ARL11Q969Q4 196 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 NCOR1P1Q9H4R4 102 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 RCC2Q9P258 522 aaKnown RBP15.77■□□□□ 0.12
SS18-209ENST00000578595 H3BUI4 141 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 SLC17A2O00624 439 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 PDCD5O14737 125 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 SLC22A1O15245 554 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 PDCD6O75340 191 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 NDUFA7O95182 113 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 ARSBP15848 533 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 JUNBP17275 347 aaPredicted RBP15.76■□□□□ 0.11
SS18-209ENST00000578595 CEACAM3P40198 252 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 ARHGDIBP52566 201 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 CLDN12P56749 244 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 PAX5Q02548 391 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 NEDD8Q15843 81 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 AANATQ16613 207 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 HES5Q5TA89 166 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 UBE2UQ5VVX9 321 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 ZNF497Q6ZNH5 498 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 OR9G1Q8NH87 305 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 RAB18Q9NP72 206 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 DPM3Q9P2X0 92 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 AMMECR1Q9Y4X0 333 aaPredicted RBP15.76■□□□□ 0.11
SS18-209ENST00000578595 V9GY05 133 aa15.76■□□□□ 0.11
SS18-209ENST00000578595 A0A1B0GUS0 222 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 LEUTXA8MZ59 168 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 SDCBPO00560 298 aaPredicted RBP15.75■□□□□ 0.11
SS18-209ENST00000578595 GZMHP20718 246 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 CD34P28906 385 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 RPS27AP62979 156 aaKnown RBP15.75■□□□□ 0.11
SS18-209ENST00000578595 HLA-DRB5Q30154 266 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 LDLRAD2Q5SZI1 272 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 C6orf183Q5T699 404 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 SYT6Q5T7P8 510 aaPredicted RBP15.75■□□□□ 0.11
SS18-209ENST00000578595 OLFML2AQ68BL7 652 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 C22orf42Q6IC83 251 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 GFI1Q99684 422 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 NICN1Q9BSH3 213 aa15.75■□□□□ 0.11
SS18-209ENST00000578595 URM1Q9BTM9 101 aaKnown RBP15.75■□□□□ 0.11
SS18-209ENST00000578595 IGHV3-43A0A0B4J1X8 118 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 CLPSL1A2RUU4 121 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 MT-ND4P03905 459 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 IGHV3-43DP0DP04 118 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 PSMD7P51665 324 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 UNC119Q13432 240 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 ARSJQ5FYB0 599 aaPredicted RBP15.74■□□□□ 0.11
SS18-209ENST00000578595 Q6ZSV7 163 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 TMEM219Q86XT9 240 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 OR51D1Q8NGF3 324 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 OR4C13Q8NGP0 309 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 CREB3L1Q96BA8 519 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 ZNF747Q9BV97 191 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 CHMP1AQ9HD42 196 aaPredicted RBP15.74■□□□□ 0.11
SS18-209ENST00000578595 PITPNC1Q9UKF7 332 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 TCF19Q9Y242 345 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 RNF114Q9Y508 228 aa15.74■□□□□ 0.11
SS18-209ENST00000578595 TRDV1A0A1B0GX56 115 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 A0A1W2PPE3 182 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 POM121CA8CG34 1229 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 BUB1B-PAK6H3BSN5 160 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 SPINT2O43291 252 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 CGB3P0DN86 165 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 CGB7P0DN87 165 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 BLVRBP30043 206 aaPredicted RBP15.73■□□□□ 0.11
SS18-209ENST00000578595 RANBP1P43487 201 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 KCTD21Q4G0X4 260 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 UTF1Q5T230 341 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 SIGIRRQ6IA17 410 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 SHISA2Q6UWI4 295 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 C6orf201Q7Z4U5 140 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 OR10X1Q8NGY0 326 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 SETD6Q8TBK2 473 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 TOMM40LQ969M1 308 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 RPEQ96AT9 228 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 MMP28Q9H239 520 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 RAB9BQ9NP90 201 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 KCNIP1Q9NZI2 227 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 GNG12Q9UBI6 72 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 PSG11Q9UQ72 335 aa15.73■□□□□ 0.11
SS18-209ENST00000578595 A0A087X0M5 115 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 A0A1B0GX30 115 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 SMIM30A4D0T7 59 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 VGLL3A8MV65 326 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 TMEM14DPA8MWL7 114 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 NPIPB11E5RHQ5 1161 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 J3QR06 171 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 CHST1O43916 411 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 CA11O75493 328 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 IGLV1-47P01700 117 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 RAB3BP20337 219 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 CHATP28329 748 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 BRS3P32247 399 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 MNDAP41218 407 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 OR10A3P58181 314 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 TPTE2P1Q5T6R2 138 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 TRAT1Q6PIZ9 186 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 LIAT1Q6ZQX7 453 aa15.72■□□□□ 0.11
SS18-209ENST00000578595 OR2W3Q7Z3T1 314 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms