RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 RPEL1Q2QD12 228 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 ANKRD55Q3KP44 614 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 JMJD6Q6NYC1 403 aaPredicted RBP7.89□□□□□ -1.15
CDH8-203ENST00000577390 ZNF66Q6ZN08 573 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 UBE2ZQ9H832 354 aaPredicted RBP7.89□□□□□ -1.15
CDH8-203ENST00000577390 TGIF2-C20orf24A0A0A6YYL0 155 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 RBFOX2O43251 390 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDH8-203ENST00000577390 FCGR3AP08637 254 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 RCC1P18754 421 aaPredicted RBP7.89□□□□□ -1.15
CDH8-203ENST00000577390 TDGF1P3P51864 188 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 H3BP45 60 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 HMGN2P05204 90 aaKnown RBP7.89□□□□□ -1.15
CDH8-203ENST00000577390 CEACAM6P40199 344 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 TRAT1Q6PIZ9 186 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 MYPOPQ86VE0 399 aaPredicted RBP7.89□□□□□ -1.15
CDH8-203ENST00000577390 BCORP1Q8N888 145 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 NKAIN3Q8N8D7 197 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 OR4C16Q8NGL9 310 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 TMEM37Q8WXS4 190 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 FIZ1Q96SL8 496 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 SMDT1Q9H4I9 107 aa7.89□□□□□ -1.15
CDH8-203ENST00000577390 LANCL1O43813 399 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 MUC1P15941 1255 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 GALNSP34059 522 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 DLX6P56179 175 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 C1orf185Q5T7R7 199 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 ASTLQ6HA08 431 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 OR4C3Q8NH37 302 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 ZNF480Q8WV37 535 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 PERPQ96FX8 193 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 NUP210LQ5VU65 1888 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 TMIGD3P0DMS9 266 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 COL8A1P27658 744 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 HES3Q5TGS1 186 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 MBOAT2Q6ZWT7 520 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 hADV38S2A0JD32 116 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 PGPA6NDG6 321 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 ST8SIA3O43173 380 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 VAMP5O95183 116 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 GPR75O95800 540 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 B4GALT1P15291 398 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 SHC1P29353 583 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 NPBWR2P48146 333 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 C1QL4Q86Z23 238 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 CADM4Q8NFZ8 388 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 GNRHR2Q96P88 292 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 PPP1R3EQ9H7J1 279 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 CHST2Q9Y4C5 530 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 MT-ATP6P00846 226 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 PSMB5P28074 263 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 KLF9Q13886 244 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 OR4P4Q8NGL7 312 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 MRGPRDQ8TDS7 321 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 C6orf106Q9H6K1 298 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 PAPPAQ13219 1627 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 MED13LQ71F56 2210 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 TMEM30CPA0ZSE6 113 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 ALOX5APP20292 161 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 MAS1LP35410 378 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 SUMO3P55854 103 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 DND1Q8IYX4 353 aaKnown RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 TMEM252Q8N6L7 170 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 KIR3DL3Q8N743 410 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 DNASE2BQ8WZ79 361 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 PIK3IP1Q96FE7 263 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 RAB33BQ9H082 229 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 HSPB8Q9UJY1 196 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 WDTC1Q8N5D0 677 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 CLDN23Q96B33 292 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 GMPPAQ96IJ6 420 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 A0A087WV62 115 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 CORTO00230 105 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 FCN1O00602 326 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 SLC46A2Q9BY10 475 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 UQCR10Q9UDW1 63 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 SBF1O95248 1867 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 SNURFLB1AK76 121 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 YPEL5P62699 121 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 SIGLEC14Q08ET2 396 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.88□□□□□ -1.15
CDH8-203ENST00000577390 ATOH8Q96SQ7 321 aa7.88□□□□□ -1.15
CDH8-203ENST00000577390 TRAV38-1A0A0B4J264 116 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 RAB38P57729 211 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 PNRC1Q12796 327 aaPredicted RBP7.87□□□□□ -1.15
CDH8-203ENST00000577390 FZD2Q14332 565 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 FAAP20Q6NZ36 180 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 LRP10Q7Z4F1 713 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 CBARPQ8N350 705 aaPredicted RBP7.87□□□□□ -1.15
CDH8-203ENST00000577390 TCTEX1D1Q8N7M0 179 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 APOBEC4Q8WW27 367 aaKnown RBP7.87□□□□□ -1.15
CDH8-203ENST00000577390 TM4SF19Q96DZ7 209 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 HS3ST3A1Q9Y663 406 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 LDLRAD4O15165 306 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 FCARP24071 287 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 GALR1P47211 349 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 HTR3DQ70Z44 454 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 OR8G5Q8NG78 346 aa7.87□□□□□ -1.15
CDH8-203ENST00000577390 HEXA-AS1Q9H8Q6 139 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms