RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 RAB18Q9NP72 206 aa11□□□□□ -0.65
CIITA-210ENST00000575513 TNFRSF19Q9NS68 423 aa11□□□□□ -0.65
CIITA-210ENST00000575513 ING3Q9NXR8 418 aa11□□□□□ -0.65
CIITA-210ENST00000575513 CALYQ9NYX4 217 aa11□□□□□ -0.65
CIITA-210ENST00000575513 C1RLQ9NZP8 487 aa11□□□□□ -0.65
CIITA-210ENST00000575513 ZNF581Q9P0T4 197 aa11□□□□□ -0.65
CIITA-210ENST00000575513 ORC5O43913 435 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 VSIG8P0DPA2 414 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 HTR1DP28221 377 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 GLP1RP43220 463 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 PRRX1P54821 245 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 RPS27AP62979 156 aaKnown RBP10.99□□□□□ -0.65
CIITA-210ENST00000575513 QRFPP83859 136 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 RAB12Q6IQ22 244 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 OR2W3Q7Z3T1 314 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 DTX3Q8N9I9 347 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 OR52M1Q8NGK5 317 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 OR4P4Q8NGL7 312 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 PIFOQ8TCI5 191 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 KIRREL1Q96J84 757 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 KCTD7Q96MP8 289 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 CHCHD6Q9BRQ6 235 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 ZNF747Q9BV97 191 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 TM2D1Q9BX74 207 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 PLGRKTQ9HBL7 147 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 RAB9BQ9NP90 201 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 IDI2-AS1Q9NZ38 188 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 DPM3Q9P2X0 92 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 FBLN5Q9UBX5 448 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 PEX16Q9Y5Y5 336 aa10.99□□□□□ -0.65
CIITA-210ENST00000575513 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 TMEM14DPA8MWL7 114 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 LEUTXA8MZ59 168 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 H3BUX3 64 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 TOR1AO14656 332 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 PDCD6O75340 191 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 TSPAN9O75954 239 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 ARSBP15848 533 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 RAB3BP20337 219 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 OMGP23515 440 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 GDNFP39905 211 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 RAG2P55895 527 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 RAB11BQ15907 218 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 SSX2Q16385 188 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 TMEM30BQ3MIR4 351 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 LDLRAD2Q5SZI1 272 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 SIGIRRQ6IA17 410 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 TRAT1Q6PIZ9 186 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 ZNF554Q86TJ5 538 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 OR13F1Q8NGS4 319 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 OR9G1Q8NH87 305 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 MRGPRDQ8TDS7 321 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 NEK7Q8TDX7 302 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 TMEM59Q9BXS4 323 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 C16orf95Q9H693 158 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 ETAA1Q9NY74 926 aa10.98□□□□□ -0.65
CIITA-210ENST00000575513 NOTOA8MTQ0 251 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 OOSP1A8MZH6 123 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 C15orf65H3BRN8 121 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 AIPO00170 330 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 AIREO43918 545 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 MPIG6BO95866 241 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 CEACAM3P40198 252 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 ALDH3B2P48448 385 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 OR10A3P58181 314 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 RELBQ01201 579 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 HLA-DRB5Q30154 266 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 Q3ZCU0 254 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 DHRS7BQ6IAN0 325 aaPredicted RBP10.97□□□□□ -0.65
CIITA-210ENST00000575513 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 DYNAPQ8N1N2 210 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 FAM89BQ8N5H3 189 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 NDNFQ8TB73 568 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 FAM46BQ96A09 425 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 FAM3DQ96BQ1 224 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 NEDD4LQ96PU5 975 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 URM1Q9BTM9 101 aaKnown RBP10.97□□□□□ -0.65
CIITA-210ENST00000575513 CENPOQ9BU64 300 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 ZNF286AQ9HBT8 521 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 ABCB10Q9NRK6 738 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 STEAP1Q9UHE8 339 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 PITPNC1Q9UKF7 332 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 KIAA2026Q5HYC2 2103 aa10.97□□□□□ -0.65
CIITA-210ENST00000575513 LOC100506127A0A0U1RQW1 187 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 LY6LH3BQJ8 138 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 BUB1B-PAK6H3BSN5 160 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 J3QR06 171 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 F2RL2O00254 374 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 LDLRAD4O15165 306 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 TFAP2AP05549 437 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.65
CIITA-210ENST00000575513 CHATP28329 748 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 ARHGDIBP52566 201 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 UNC119Q13432 240 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 P2RY14Q15391 338 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 FAM189A2Q15884 450 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 C6orf183Q5T699 404 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 OLFML2AQ68BL7 652 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms