RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 CA11O75493 328 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 GPX5O75715 221 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 CDRT1O95170 752 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 GAPDHP04406 335 aaKnown RBP7.77□□□□□ -1.17
CIITA-207ENST00000571545 SNRNP70P08621 437 aaKnown RBP7.77□□□□□ -1.17
CIITA-207ENST00000571545 FAM90A15PP0C7V4 464 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 FAM90A13PP0C7W8 464 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 FAM90A14PP0C7W9 464 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 FAM90A24PP0C7X0 464 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 TMEM11P17152 192 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 JUNBP17275 347 aaPredicted RBP7.77□□□□□ -1.17
CIITA-207ENST00000571545 SSTR5P35346 364 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 GDNFP39905 211 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 ZNF816Q0VGE8 651 aaPredicted RBP7.77□□□□□ -1.17
CIITA-207ENST00000571545 SMN1Q16637 294 aaKnown RBP7.77□□□□□ -1.17
CIITA-207ENST00000571545 TMEM95Q3KNT9 176 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 FBLN7Q53RD9 439 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 ATAD3CQ5T2N8 411 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 C6orf183Q5T699 404 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 DMKNQ6E0U4 476 aaPredicted RBP7.77□□□□□ -1.17
CIITA-207ENST00000571545 BAIAP2L2Q6UXY1 529 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 RNF144BQ7Z419 303 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 FOXRED2Q8IWF2 684 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 C8orf59Q8N0T1 100 aaPredicted RBP7.77□□□□□ -1.17
CIITA-207ENST00000571545 LYG1Q8N1E2 194 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 COMMD1Q8N668 190 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 OR10K1Q8NGX5 313 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 OR56B4Q8NH76 319 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 SGCDQ92629 289 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 DPF1Q92782 380 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 GHSRQ92847 366 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 GON7Q9BXV9 100 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 PSG11Q9UQ72 335 aa7.77□□□□□ -1.17
CIITA-207ENST00000571545 A0A1W2PPI3 338 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 A0A1W2PRX2 142 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 MCRIP1C9JLW8 97 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 AIPO00170 330 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 SDCBPO00560 298 aaPredicted RBP7.76□□□□□ -1.17
CIITA-207ENST00000571545 GEMIN2O14893 280 aaKnown RBP7.76□□□□□ -1.17
CIITA-207ENST00000571545 SPINT2O43291 252 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 CD1AP06126 327 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 GLAP06280 429 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 IGFBP3P17936 291 aaPredicted RBP7.76□□□□□ -1.17
CIITA-207ENST00000571545 CD24P25063 80 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
CIITA-207ENST00000571545 GNG10P50151 68 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 ST3GAL4Q11206 333 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 DOC2BQ14184 412 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 SLC22A6Q4U2R8 563 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 C9orf152Q5JTZ5 239 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 XAF1Q6GPH4 301 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 ZNF554Q86TJ5 538 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 IZUMO1Q8IYV9 350 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 JAGN1Q8N5M9 183 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 LINC00311Q8N616 119 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 DRAM1Q8N682 238 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 WFDC9Q8NEX5 89 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 OR8H1Q8NGG4 311 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 PLPPR1Q8TBJ4 325 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 MYDGFQ969H8 173 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 ARL11Q969Q4 196 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 PHF21AQ96BD5 680 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 UQCC2Q9BRT2 126 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 CST11Q9H112 138 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 GHRLQ9UBU3 117 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 ZMAT5Q9UDW3 170 aaKnown RBP7.76□□□□□ -1.17
CIITA-207ENST00000571545 NOTCH3Q9UM47 2321 aa7.76□□□□□ -1.17
CIITA-207ENST00000571545 IGKV1D-33P01593 117 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 IGKV1-33P01594 117 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 CAPGP40121 348 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 RANBP1P43487 201 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 WNT4P56705 351 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 LOXL3P58215 753 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 DCTN2Q13561 401 aaKnown RBP7.75□□□□□ -1.17
CIITA-207ENST00000571545 LTC4SQ16873 150 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 LRRC36Q1X8D7 754 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 AWAT2Q6E213 333 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 ZNF497Q6ZNH5 498 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 Q6ZS46 218 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 TGIF2LXQ8IUE1 241 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 C5orf56Q8N8D9 126 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 OR2T10Q8NGZ9 312 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 RFESDQ8TAC1 157 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 MRAPQ8TCY5 172 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 PGLYRP3Q96LB9 341 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 OR14A2Q96R54 314 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 MCRIP2Q9BUT9 160 aaKnown RBP7.75□□□□□ -1.17
CIITA-207ENST00000571545 ZFP57Q9NU63 452 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 GFOD1Q9NXC2 390 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 RCC2Q9P258 522 aaKnown RBP7.75□□□□□ -1.17
CIITA-207ENST00000571545 TRAPPC2LQ9UL33 140 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 ERGIC3Q9Y282 383 aa7.75□□□□□ -1.17
CIITA-207ENST00000571545 MRPS28Q9Y2Q9 187 aaKnown RBP7.75□□□□□ -1.17
CIITA-207ENST00000571545 TRBV5-7A0A0A0MS05 114 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 IGHV1-3A0A0C4DH29 117 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 SERPINE3A8MV23 424 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 AP4M1O00189 453 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 RRP9O43818 475 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms