RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FAM192AQ9GZU8 254 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 TAS2R4Q9NYW5 299 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 ING4Q9UNL4 249 aa11.84□□□□□ -0.51
RNF40-209ENST00000566703 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 OGG1O15527 345 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 ORC5O43913 435 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 OR7C1O76099 320 aaPredicted RBP11.83□□□□□ -0.52
RNF40-209ENST00000566703 DCKP27707 260 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 ZNF93P35789 620 aaPredicted RBP11.83□□□□□ -0.52
RNF40-209ENST00000566703 GNG10P50151 68 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
RNF40-209ENST00000566703 PPP3R1P63098 170 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 GPR176Q14439 515 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 TEX38Q6PEX7 206 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 UNQ9370/PRO34162Q6UXP9 181 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 TMPRSS11AQ6ZMR5 421 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 TGIF2LXQ8IUE1 241 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 IZUMO1Q8IYV9 350 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 STPG2Q8N412 459 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 OR2T10Q8NGZ9 312 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 ARL11Q969Q4 196 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 TMEM106AQ96A25 262 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 EAF1Q96JC9 268 aaPredicted RBP11.83□□□□□ -0.52
RNF40-209ENST00000566703 S100A13Q99584 98 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 SLC29A1Q99808 456 aa11.83□□□□□ -0.52
RNF40-209ENST00000566703 IRGMA1A4Y4 181 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 NUDT19A8MXV4 375 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 AP4M1O00189 453 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 HSD17B6O14756 317 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 GPX5O75715 221 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 CDRT1O95170 752 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 MT-ND4P03905 459 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 IL3RAP26951 378 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 CD1BP29016 333 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 BDKRB2P30411 391 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 HOXD3P31249 432 aaPredicted RBP11.82□□□□□ -0.52
RNF40-209ENST00000566703 PNLIPRP3Q17RR3 467 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 MOB3BQ86TA1 216 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 ZNF695Q8IW36 515 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 Q8N6K4 173 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 OR8H1Q8NGG4 311 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 ST6GALNAC6Q969X2 333 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 ABCG5Q9H222 651 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 RAB9BQ9NP90 201 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.82□□□□□ -0.52
RNF40-209ENST00000566703 LIN7CQ9NUP9 197 aaKnown RBP11.82□□□□□ -0.52
RNF40-209ENST00000566703 GFOD1Q9NXC2 390 aa11.82□□□□□ -0.52
RNF40-209ENST00000566703 TRAV39A0A0B4J263 110 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 NCBP2LA6PVI3 153 aaKnown RBP11.81□□□□□ -0.52
RNF40-209ENST00000566703 H0YHG0 523 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 SDCBPO00560 298 aaPredicted RBP11.81□□□□□ -0.52
RNF40-209ENST00000566703 GEMIN2O14893 280 aaKnown RBP11.81□□□□□ -0.52
RNF40-209ENST00000566703 RAMP3O60896 148 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 GTF2F2P13984 249 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 TMEM30BQ3MIR4 351 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 DDI2Q5TDH0 399 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 C8orf86Q6ZUL3 223 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 STX19Q8N4C7 294 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 KLHL30-AS1Q8NEE0 82 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 APH1BQ8WW43 257 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 MRPS24Q96EL2 167 aaKnown RBP11.81□□□□□ -0.52
RNF40-209ENST00000566703 RDH12Q96NR8 316 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 SPACA1Q9HBV2 294 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 BABAM2Q9NXR7 383 aa11.81□□□□□ -0.52
RNF40-209ENST00000566703 A0A1W2PPE3 182 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 CCL24O00175 119 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 MOSP00540 346 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 IGFBP3P17936 291 aaPredicted RBP11.8□□□□□ -0.52
RNF40-209ENST00000566703 GPR12P47775 334 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 ETV1P50549 477 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 CD69Q07108 199 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 KIR2DS1Q14954 304 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 ATAD3CQ5T2N8 411 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 STEAP3Q658P3 488 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 XAF1Q6GPH4 301 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 ZNF497Q6ZNH5 498 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 C18orf65Q6ZTR6 163 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 RNF152Q8N8N0 203 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 Q8N9W7 124 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 TMEM104Q8NE00 496 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 ZNF555Q8NEP9 628 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 RTN4IP1Q8WWV3 396 aaPredicted RBP11.8□□□□□ -0.52
RNF40-209ENST00000566703 SMIM19Q96E16 107 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 S100A14Q9HCY8 104 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 PLSCR3Q9NRY6 295 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 ZNF581Q9P0T4 197 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 LINC00527Q9UJ94 153 aa11.8□□□□□ -0.52
RNF40-209ENST00000566703 TRBV5-5A0A0J9YX44 114 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 LINC01548A6NM66 108 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 TXNL1O43396 289 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 WBP4O75554 376 aaKnown RBP11.79□□□□□ -0.52
RNF40-209ENST00000566703 ELANEP08246 267 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 SERPINA2P20848 420 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
RNF40-209ENST00000566703 ZNF137PP52743 207 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 DGCR2P98153 550 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 FOXE3Q13461 319 aa11.79□□□□□ -0.52
RNF40-209ENST00000566703 RIPK1Q13546 671 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms