RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 OPALINQ96PE5 141 aa10.02□□□□□ -0.81
RNF40-208ENST00000565995 ASCL2Q99929 193 aa10.02□□□□□ -0.81
RNF40-208ENST00000565995 RBFOX1Q9NWB1 397 aaKnown RBP10.02□□□□□ -0.81
RNF40-208ENST00000565995 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 ZNF729A6NN14 1252 aaPredicted RBP10.01□□□□□ -0.81
RNF40-208ENST00000565995 SERPINE3A8MV23 424 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 H3BSH0 61 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 CCRL2O00421 344 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 SH2D1BO14796 132 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 BCL3P20749 454 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 DUSP1P28562 367 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 RPL5P46777 297 aaKnown RBP10.01□□□□□ -0.81
RNF40-208ENST00000565995 GLIPR1P48060 266 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 RBP2P50120 134 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 NANOS3P60323 173 aaKnown RBP10.01□□□□□ -0.81
RNF40-208ENST00000565995 EBI3Q14213 229 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 C17orf58Q2M2W7 97 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 UTF1Q5T230 341 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 FOXRED2Q8IWF2 684 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 PRSS35Q8N3Z0 413 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 OR4D6Q8NGJ1 314 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 OR5AK2Q8NH90 309 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 TSEN15Q8WW01 171 aaKnown RBP10.01□□□□□ -0.81
RNF40-208ENST00000565995 BORCS8Q96FH0 119 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 DUX3Q96PT4 197 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 TMED9Q9BVK6 235 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 LINC00574Q9H8X3 128 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 RHOFQ9HBH0 211 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 HMG20AQ9NP66 347 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 ISYNA1Q9NPH2 558 aa10.01□□□□□ -0.81
RNF40-208ENST00000565995 ZNF256Q9Y2P7 627 aaPredicted RBP10.01□□□□□ -0.81
RNF40-208ENST00000565995 SIRT4Q9Y6E7 314 aaPredicted RBP10.01□□□□□ -0.81
RNF40-208ENST00000565995 ODAMA1E959 279 aa10□□□□□ -0.81
RNF40-208ENST00000565995 FAM172BPA6NC97 362 aa10□□□□□ -0.81
RNF40-208ENST00000565995 TMEM212A6NML5 194 aa10□□□□□ -0.81
RNF40-208ENST00000565995 J3QR06 171 aa10□□□□□ -0.81
RNF40-208ENST00000565995 SYT7O43581 403 aa10□□□□□ -0.81
RNF40-208ENST00000565995 OR2H2O95918 312 aa10□□□□□ -0.81
RNF40-208ENST00000565995 SERPINA3P01011 423 aa10□□□□□ -0.81
RNF40-208ENST00000565995 UBCP0CG48 685 aaKnown RBP10□□□□□ -0.81
RNF40-208ENST00000565995 ECI1P42126 302 aa10□□□□□ -0.81
RNF40-208ENST00000565995 PTGFRP43088 359 aa10□□□□□ -0.81
RNF40-208ENST00000565995 KIR3DL2P43630 455 aa10□□□□□ -0.81
RNF40-208ENST00000565995 INSL3P51460 131 aa10□□□□□ -0.81
RNF40-208ENST00000565995 ATP1B3P54709 279 aa10□□□□□ -0.81
RNF40-208ENST00000565995 AESQ08117 197 aa10□□□□□ -0.81
RNF40-208ENST00000565995 FHL3Q13643 280 aa10□□□□□ -0.81
RNF40-208ENST00000565995 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
RNF40-208ENST00000565995 SYT6Q5T7P8 510 aaPredicted RBP10□□□□□ -0.81
RNF40-208ENST00000565995 SLC35E3Q7Z769 313 aa10□□□□□ -0.81
RNF40-208ENST00000565995 DRAM1Q8N682 238 aa10□□□□□ -0.81
RNF40-208ENST00000565995 PP6455Q8WZ26 134 aa10□□□□□ -0.81
RNF40-208ENST00000565995 RCHY1Q96PM5 261 aa10□□□□□ -0.81
RNF40-208ENST00000565995 PDCD1LG2Q9BQ51 273 aa10□□□□□ -0.81
RNF40-208ENST00000565995 GON7Q9BXV9 100 aa10□□□□□ -0.81
RNF40-208ENST00000565995 NCOR1P1Q9H4R4 102 aa10□□□□□ -0.81
RNF40-208ENST00000565995 PLEKHA1Q9HB21 404 aa10□□□□□ -0.81
RNF40-208ENST00000565995 FRRS1LQ9P0K9 344 aa10□□□□□ -0.81
RNF40-208ENST00000565995 LINC00527Q9UJ94 153 aa10□□□□□ -0.81
RNF40-208ENST00000565995 AMMECR1Q9Y4X0 333 aaPredicted RBP10□□□□□ -0.81
RNF40-208ENST00000565995 IGKV1-9A0A0C4DH69 117 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 KBTBD11-OT1A0A1B0GTJ5 212 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 LOC107986453A0A1B0GWG9 222 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 SEC14L6B5MCN3 397 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 OGG1O15527 345 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 NOL3O60936 208 aaKnown RBP9.99□□□□□ -0.81
RNF40-208ENST00000565995 CYB5AP00167 134 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 RPLP1P05386 114 aaKnown RBP9.99□□□□□ -0.81
RNF40-208ENST00000565995 TFAP2AP05549 437 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 ELANEP08246 267 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 LYL1P12980 280 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 CD36P16671 472 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 CPEP16870 476 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 TMEM11P17152 192 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 PRKACAP17612 351 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 RAB7AP51149 207 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 CCR9P51686 369 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 RPS25P62851 125 aaKnown RBP9.99□□□□□ -0.81
RNF40-208ENST00000565995 PDZK1IP1Q13113 114 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 FOXE3Q13461 319 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 TPBGQ13641 420 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 DMKNQ6E0U4 476 aaPredicted RBP9.99□□□□□ -0.81
RNF40-208ENST00000565995 Q6P435 159 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 FDX2Q6P4F2 183 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 SLC16A12Q6ZSM3 486 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 SATL1Q86VE3 508 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 SBSPONQ8IVN8 264 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 OR8H3Q8N146 312 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 OR56B4Q8NH76 319 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 GHSRQ92847 366 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 TOMM40LQ969M1 308 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 TMEM203Q969S6 136 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 RPEQ96AT9 228 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 COQ2Q96H96 371 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 KIRREL1Q96J84 757 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 EXOSC4Q9NPD3 245 aaKnown RBP9.99□□□□□ -0.81
RNF40-208ENST00000565995 NDUFB11Q9NX14 153 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 SMAD5-AS1Q9Y6J3 95 aa9.99□□□□□ -0.81
RNF40-208ENST00000565995 CCDC160A6NGH7 325 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms