RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PRRX1P54821 245 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 RAG2P55895 527 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 RPL15P61313 204 aaKnown RBP8.05□□□□□ -1.12
CDH1-206ENST00000564676 PAX5Q02548 391 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 P2RY14Q15391 338 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 RAB11BQ15907 218 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 AANATQ16613 207 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 LINC01559Q495D7 138 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 NKAPLQ5M9Q1 402 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 UBE2UQ5VVX9 321 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 ZNF773Q6PK81 442 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 DYNAPQ8N1N2 210 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 KCNG3Q8TAE7 436 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 Q96M66 194 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 NEDD4LQ96PU5 975 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 TMEM59Q9BXS4 323 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 BEX1Q9HBH7 125 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 ZNF286AQ9HBT8 521 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 NDUFB11Q9NX14 153 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 RCC2Q9P258 522 aaKnown RBP8.05□□□□□ -1.12
CDH1-206ENST00000564676 TRAPPC2LQ9UL33 140 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 STAB1Q9NY15 2570 aa8.05□□□□□ -1.12
CDH1-206ENST00000564676 A0A1B0GUS0 222 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 UBE2QL1A1L167 161 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 POM121CA8CG34 1229 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 SLC17A2O00624 439 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 SLC22A1O15245 554 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 PDCD6O75340 191 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 NDUFA7O95182 113 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 GLAP06280 429 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 CD37P11049 281 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 ARSBP15848 533 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 MDKP21741 143 aaPredicted RBP8.04□□□□□ -1.12
CDH1-206ENST00000564676 CD34P28906 385 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 SSTR5P35346 364 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 LDLRAD2Q5SZI1 272 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 ZNF497Q6ZNH5 498 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 OR4P4Q8NGL7 312 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 OR9G1Q8NH87 305 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 ARL11Q969Q4 196 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 CREB3L1Q96BA8 519 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 KIRREL1Q96J84 757 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 GFI1Q99684 422 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 URM1Q9BTM9 101 aaKnown RBP8.04□□□□□ -1.12
CDH1-206ENST00000564676 KCNK15Q9H427 330 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 DPM3Q9P2X0 92 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 V9GY05 133 aa8.04□□□□□ -1.12
CDH1-206ENST00000564676 A0A087X0M5 115 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 TRAV1-2A0A0B4J238 106 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 A0A1B0GX30 115 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 CLPSL1A2RUU4 121 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 VGLL3A8MV65 326 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 TMEM14DPA8MWL7 114 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 LEUTXA8MZ59 168 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 NPIPB11E5RHQ5 1161 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 CA11O75493 328 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 IGHV3-7P01780 117 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 GALP22466 123 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 BLVRBP30043 206 aaPredicted RBP8.03□□□□□ -1.12
CDH1-206ENST00000564676 RAB13P51153 203 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 CLDN12P56749 244 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 RPS27AP62979 156 aaKnown RBP8.03□□□□□ -1.12
CDH1-206ENST00000564676 RELBQ01201 579 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 UNC119Q13432 240 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 NEDD8Q15843 81 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 HLA-DRB5Q30154 266 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 KCTD21Q4G0X4 260 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 C6orf183Q5T699 404 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 SYT6Q5T7P8 510 aaPredicted RBP8.03□□□□□ -1.12
CDH1-206ENST00000564676 HES5Q5TA89 166 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 SIGIRRQ6IA17 410 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 C22orf42Q6IC83 251 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 CD200R1LQ6Q8B3 271 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 OR2W3Q7Z3T1 314 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 OR10A7Q8NGE5 316 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 OR4K15Q8NH41 348 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 UBALD1Q8TB05 177 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 LEAP2Q969E1 77 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 ZNF747Q9BV97 191 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 TM2D1Q9BX74 207 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 LINC00574Q9H8X3 128 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 RAB18Q9NP72 206 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 RAB9BQ9NP90 201 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 SSR3Q9UNL2 185 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 MMP24Q9Y5R2 645 aa8.03□□□□□ -1.12
CDH1-206ENST00000564676 C15orf65H3BRN8 121 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 BUB1B-PAK6H3BSN5 160 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 J3QR06 171 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 F2RL2O00254 374 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 SPINT2O43291 252 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 ORC5O43913 435 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 IGLV1-47P01700 117 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 JUNBP17275 347 aaPredicted RBP8.02□□□□□ -1.13
CDH1-206ENST00000564676 CHATP28329 748 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 CEACAM3P40198 252 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 GNG10P50151 68 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 ARHGDIBP52566 201 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 OR10A3P58181 314 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 QRFPP83859 136 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 C2orf76Q3KRA6 126 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms