RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 PRDX2P32119 198 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 ALDH3B2P48448 385 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 AWAT2Q6E213 333 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 ELP2Q6IA86 826 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 GLIPR1L1Q6UWM5 242 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 ETV3LQ6ZN32 361 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 LHFPL4Q7Z7J7 247 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 KCTD7Q96MP8 289 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 SEBOXQ9HB31 216 aaPredicted RBP12.69□□□□□ -0.38
RNF40-205ENST00000563909 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 V9GY05 133 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 IGKV1D-17A0A075B6S4 117 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 AIREO43918 545 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 CDRT1O95170 752 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 HTR3BO95264 441 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 UBBP0CG47 229 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 RAB3BP20337 219 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 ZNF146Q15072 292 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 SPIN3Q5JUX0 258 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 GPR141Q7Z602 305 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 TPRA1Q86W33 373 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 OR6M1Q8NGM8 313 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 SDSLQ96GA7 329 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 FUNDC2Q9BWH2 189 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 OR14J1Q9UGF5 321 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 SCOCQ9UIL1 159 aa12.68□□□□□ -0.38
RNF40-205ENST00000563909 SH2D1BO14796 132 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 COX7A1P24310 79 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 HTR2CP28335 458 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 RPL5P46777 297 aaKnown RBP12.67□□□□□ -0.38
RNF40-205ENST00000563909 C10orf99Q6UWK7 81 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 OSR2Q8N2R0 312 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 CD177Q8N6Q3 437 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 ZNRF1Q8ND25 227 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 OR51D1Q8NGF3 324 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 OR10K1Q8NGX5 313 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 GFI1Q99684 422 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 CENPOQ9BU64 300 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 PLGRKTQ9HBL7 147 aa12.67□□□□□ -0.38
RNF40-205ENST00000563909 SHISA3A0PJX4 238 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 RBMY1BA6NDE4 496 aaKnown RBP12.66□□□□□ -0.38
RNF40-205ENST00000563909 RBMY1EA6NEQ0 496 aaKnown RBP12.66□□□□□ -0.38
RNF40-205ENST00000563909 SLC17A2O00624 439 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 SLC22A1O15245 554 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 HAND1O96004 215 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 RBMY1DP0C7P1 496 aaKnown RBP12.66□□□□□ -0.38
RNF40-205ENST00000563909 CALCBP10092 127 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 GTF2F2P13984 249 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 SERPINA2P20848 420 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 THBS3P49746 956 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 CAPZA1P52907 286 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 RAB11BQ15907 218 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 SLC22A6Q4U2R8 563 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 TMEM185AQ8NFB2 350 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 OR51T1Q8NGJ9 327 aa12.66□□□□□ -0.38
RNF40-205ENST00000563909 MRPS24Q96EL2 167 aaKnown RBP12.66□□□□□ -0.38
RNF40-205ENST00000563909 FAM90A8PA6NJQ4 464 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 SDC2P34741 201 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 CEBPDP49716 269 aaPredicted RBP12.65□□□□□ -0.38
RNF40-205ENST00000563909 SNU13P55769 128 aaKnown RBP12.65□□□□□ -0.38
RNF40-205ENST00000563909 IL13RA2Q14627 380 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 SSX2Q16385 188 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 NHLRC3Q5JS37 347 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 ANKRD13BQ86YJ7 626 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 CST11Q9H112 138 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 RNF167Q9H6Y7 350 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 C19orf12Q9NSK7 152 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 IL36RNQ9UBH0 155 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 STEAP1Q9UHE8 339 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 ST3GAL6Q9Y274 331 aa12.65□□□□□ -0.38
RNF40-205ENST00000563909 NOTOA8MTQ0 251 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 DEGS1O15121 323 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 CRTAPO75718 401 aaPredicted RBP12.64□□□□□ -0.39
RNF40-205ENST00000563909 BPNT1O95861 308 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 DUSP1P28562 367 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 OR10A3P58181 314 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
RNF40-205ENST00000563909 GPR107Q5VW38 600 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 LINC00596Q86U02 117 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 KCNG3Q8TAE7 436 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 RBMXL1Q96E39 390 aaKnown RBP12.64□□□□□ -0.39
RNF40-205ENST00000563909 SNX22Q96L94 193 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 CITED4Q96RK1 184 aa12.64□□□□□ -0.39
RNF40-205ENST00000563909 FRAS1Q86XX4 4008 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 A0A1W2PP11 408 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 A0A1W2PPH5 198 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 IFITM5A6NNB3 132 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 K7N7A8 449 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 AIPO00170 330 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 OR2H2O95918 312 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 TK1P04183 234 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 ZNF44P15621 663 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms