RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ERVS71-1P61550 626 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 VAMP2P63027 116 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 PMP22Q01453 160 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 RNPS1Q15287 305 aaKnown RBP8.55□□□□□ -1.04
LRRC28-216ENST00000559819 AVPI1Q5T686 147 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 TMPRSS7Q7RTY8 843 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 WDR86Q86TI4 376 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 PRR18Q8N4B5 295 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 OR5C1Q8NGR4 320 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 RARRES2Q99969 163 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 DLL3Q9NYJ7 618 aa8.55□□□□□ -1.04
LRRC28-216ENST00000559819 TNRC6AQ8NDV7 1962 aaKnown RBP8.55□□□□□ -1.04
LRRC28-216ENST00000559819 H3BP45 60 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 M0R036 132 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 SIRPB1O00241 398 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 CHST1O43916 411 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 PITX3O75364 302 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 OR13C7P0DN81 318 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 LMO1P25800 156 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 HLA-DRB3P79483 266 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 RUNX1Q01196 453 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 ZNF154Q13106 437 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 CLN3Q13286 438 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 SLC10A1Q14973 349 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 SRSF7Q16629 238 aaKnown RBP eCLIP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 ZNF324BQ6AW86 544 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 BCL2L2Q92843 193 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 ISOC2Q96AB3 205 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 PLEKHF2Q9H8W4 249 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 RNF122Q9H9V4 155 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 LYRM2Q9NU23 88 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 TAAR3PQ9P1P4 343 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 ERRFI1Q9UJM3 462 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 STRAPQ9Y3F4 350 aaKnown RBP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 FAM186AA6NE01 2351 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 PSG2P11465 335 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 SELEP16581 610 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 GNG3P63215 75 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 HOXA4Q00056 320 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 ALKBH6Q3KRA9 238 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 HES3Q5TGS1 186 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 ZNF573Q86YE8 665 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 WDYHV1Q96HA8 205 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 SPIN2AQ99865 258 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 SPIN2BQ9BPZ2 258 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 OR51I2Q9H344 312 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 SMCO4Q9NRQ5 59 aa8.54□□□□□ -1.04
LRRC28-216ENST00000559819 KLF13Q9Y2Y9 288 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-216ENST00000559819 DEGS1O15121 323 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 VDAC1P21796 283 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 ID3Q02535 119 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 P4HA3Q7Z4N8 544 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 CMTM1Q8IZ96 169 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 CD300LFQ8TDQ1 290 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 GPR146Q96CH1 333 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 ZNF175Q9Y473 711 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 MPC1Q9Y5U8 109 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 C7orf77A4D0Y5 90 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 OR5B21A6NL26 309 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 UMAD1C9J7I0 102 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 H0Y980 276 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 KLRC4-KLRK1H3BQV0 150 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 PAX9P55771 341 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 IL24Q13007 206 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 HABP2Q14520 560 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-216ENST00000559819 FBXW9Q5XUX1 488 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 Q6P435 159 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 H1FOOQ8IZA3 346 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-216ENST00000559819 IL22RA1Q8N6P7 574 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 OR5D13Q8NGL4 314 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 OR10J5Q8NHC4 309 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 OR2W1Q9Y3N9 320 aa8.53□□□□□ -1.04
LRRC28-216ENST00000559819 KLF2Q9Y5W3 355 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-216ENST00000559819 A0A1W2PPH5 198 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 WISP2O76076 250 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 CTXN2P0C2S0 81 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 F2RP25116 425 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 CEBPDP49716 269 aaPredicted RBP8.52□□□□□ -1.04
LRRC28-216ENST00000559819 RAB5CP51148 216 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 TMEM267Q0VDI3 215 aaPredicted RBP8.52□□□□□ -1.04
LRRC28-216ENST00000559819 ZNF880Q6PDB4 577 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 Q6ZRM9 215 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 ZNF295-AS1Q8N0V1 137 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 COMMD1Q8N668 190 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 HIST1H2BAQ96A08 127 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 OR2J1Q9GZK6 312 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 SLC25A31Q9H0C2 315 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 GP6Q9HCN6 339 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 PPP1R3CQ9UQK1 317 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 ARHGAP21Q5T5U3 1957 aa8.52□□□□□ -1.04
LRRC28-216ENST00000559819 ESPL1Q14674 2120 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 URB1O60287 2271 aaKnown RBP8.52□□□□□ -1.05
LRRC28-216ENST00000559819 TRGV5A0A0B4J1U4 118 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 CLEC18AA5D8T8 446 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 A6NLC8 198 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 PRSS44E7EML9 344 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 M0R296 226 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 WRBO00258 174 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms