RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 IGLV1-47P01700 117 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 IGHV3-43DP0DP04 118 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 GZMHP20718 246 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 CRHBPP24387 322 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 VHLP40337 213 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 KIR2DS4P43632 304 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 MAP2K4P45985 399 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 DYNLT3P51808 116 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 EFNB2P52799 333 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 RPS25P62851 125 aaKnown RBP6.59□□□□□ -1.35
SNX1-207ENST00000559401 HES1Q14469 280 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 IRF3Q14653 427 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 UTF1Q5T230 341 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 CCDC144NLQ6NUI1 221 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 C11orf88Q6PI97 169 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 TMEM104Q8NE00 496 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 OR10X1Q8NGY0 326 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 OR4K15Q8NH41 348 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 AKR1E2Q96JD6 320 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 MMP28Q9H239 520 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 NCOR1P1Q9H4R4 102 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 DUSP21Q9H596 190 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 IFT22Q9H7X7 185 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 ZNF702PQ9H963 129 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 PLGRKTQ9HBL7 147 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 PSG11Q9UQ72 335 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 A0A087X0M5 115 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 A0A1B0GX30 115 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 NPIPB11E5RHQ5 1161 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 SPINT2O43291 252 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 ARL6IP5O75915 188 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 UBBP0CG47 229 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 CGB3P0DN86 165 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 CGB7P0DN87 165 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 SRMP19623 302 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 FUT3P21217 361 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 HTR2CP28335 458 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 VDAC2P45880 294 aaPredicted RBP6.58□□□□□ -1.36
SNX1-207ENST00000559401 PAX5Q02548 391 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 MLLT11Q13015 90 aaPredicted RBP6.58□□□□□ -1.36
SNX1-207ENST00000559401 MADCAM1Q13477 382 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 HERPUD1Q15011 391 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 TRAM1Q15629 374 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 C2orf68Q2NKX9 166 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 C9orf152Q5JTZ5 239 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 C6orf183Q5T699 404 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 SYT6Q5T7P8 510 aaPredicted RBP6.58□□□□□ -1.36
SNX1-207ENST00000559401 HIST2H2BDQ6DRA6 164 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 OR10K2Q6IF99 312 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 UNQ9370/PRO34162Q6UXP9 181 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 ZNF497Q6ZNH5 498 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 PRSS48Q7RTY5 328 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 LRRTM1Q86UE6 522 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 OR10A7Q8NGE5 316 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 PHYHIPQ92561 330 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 Q96M66 194 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 NEDD4LQ96PU5 975 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 MGLLQ99685 303 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 SLC25A33Q9BSK2 321 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 TMEM59Q9BXS4 323 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 KCNK15Q9H427 330 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 Q9H521 79 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 RAB9BQ9NP90 201 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 RCC2Q9P258 522 aaKnown RBP6.58□□□□□ -1.36
SNX1-207ENST00000559401 GNG12Q9UBI6 72 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 GHRLQ9UBU3 117 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 RAB26Q9ULW5 256 aa6.58□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A10PA6NDY2 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A18PA6NE21 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A16PA6NEW6 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A20PA6NIJ5 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A7PA6NKC0 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A22PA8MWA6 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A12PA8MX19 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A5PA8MXJ8 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A23PA8MXZ1 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 OOSP1A8MZH6 123 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 C12orf77C9JDV5 145 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 HSD17B6O14756 317 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 ORC5O43913 435 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 PDCD6O75340 191 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FBXO24O75426 580 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 TSPAN15O95858 294 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 MT-ND4P03905 459 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 SNRNP70P08621 437 aaKnown RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 CSF1P09603 554 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 UCHL1P09936 223 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A15PP0C7V4 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A13PP0C7W8 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A14PP0C7W9 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM90A24PP0C7X0 464 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 PSMA1P25786 263 aaKnown RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 IL3RAP26951 378 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 CALRP27797 417 aaKnown RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 REG1BP48304 166 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 RAB7AP51149 207 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 GP2P55259 537 aaKnown RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 BLCAPP62952 87 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 TPBGQ13641 420 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 P2RY14Q15391 338 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms