RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 URM1Q9BTM9 101 aaKnown RBP8.88□□□□□ -0.99
TPM1-217ENST00000559108 NCOR1P1Q9H4R4 102 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 LINC00574Q9H8X3 128 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 ZNF286AQ9HBT8 521 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 SPACA1Q9HBV2 294 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 MBNL3Q9NUK0 354 aaKnown RBP8.88□□□□□ -0.99
TPM1-217ENST00000559108 HSF4Q9ULV5 492 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 SPATA2Q9UM82 520 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 UBE2J1Q9Y385 318 aaPredicted RBP8.88□□□□□ -0.99
TPM1-217ENST00000559108 ETV7Q9Y603 341 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 TRGV10A0A0A0MS01 117 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 IGHV1-69DA0A0B4J2H0 117 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 A0A0U1RQK1 487 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 KBTBD11-OT1A0A1B0GTJ5 212 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 ODF3BA8MYP8 253 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 IGHV1-69P01742 117 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 IGHV3-7P01780 117 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 GLAP06280 429 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 ZNF182P17025 639 aaPredicted RBP8.87□□□□□ -0.99
TPM1-217ENST00000559108 ELK1P19419 428 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 CDK2P24941 298 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 LOXL3P58215 753 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 LTC4SQ16873 150 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 ZNF260Q3ZCT1 412 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 CHRFAM7AQ494W8 412 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 HEPN1Q6WQI6 88 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 C1orf122Q6ZSJ8 110 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 OR56B1Q8NGI3 324 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 MAFIPQ8WZ33 124 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 RAB3CQ96E17 227 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 POM121Q96HA1 1249 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 NEDD4LQ96PU5 975 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 SLC6A7Q99884 636 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 SUCNR1Q9BXA5 334 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 BEX2Q9BXY8 128 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 SLIRPQ9GZT3 109 aaKnown RBP8.87□□□□□ -0.99
TPM1-217ENST00000559108 METTL8Q9H825 291 aaKnown RBP8.87□□□□□ -0.99
TPM1-217ENST00000559108 ABRACLQ9P1F3 81 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 CDC42EP3Q9UKI2 254 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 NUP50Q9UKX7 468 aa8.87□□□□□ -0.99
TPM1-217ENST00000559108 IGHV3-43A0A0B4J1X8 118 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 IGKV1-6A0A0C4DH72 117 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 TMEM235A6NFC5 223 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 ZNF729A6NN14 1252 aaPredicted RBP8.86□□□□□ -0.99
TPM1-217ENST00000559108 CTDSP2O14595 271 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 RBP4P02753 201 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 FAM157CP0CG43 387 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 IGHV3-43DP0DP04 118 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 SRD5A1P18405 259 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 EPHA1P21709 976 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 SCAND1P57086 179 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 GUCA2AQ02747 115 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 RBM39Q14498 530 aaKnown RBP8.86□□□□□ -0.99
TPM1-217ENST00000559108 GNMTQ14749 295 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 HMGN3Q15651 99 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 FBLN7Q53RD9 439 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 Q6ZTK2 550 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 LHFPL4Q7Z7J7 247 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 NANPQ8TBE9 248 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 NUDCD2Q8WVJ2 157 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 RBMXL1Q96E39 390 aaKnown RBP8.86□□□□□ -0.99
TPM1-217ENST00000559108 BCL7BQ9BQE9 202 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 PARP12Q9H0J9 701 aaKnown RBP8.86□□□□□ -0.99
TPM1-217ENST00000559108 ABCG5Q9H222 651 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 ESM1Q9NQ30 184 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.86□□□□□ -0.99
TPM1-217ENST00000559108 PLEKHJ1Q9NW61 149 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 TAS2R3Q9NYW6 316 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 OR6C3Q9NZP0 311 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 COMMD3Q9UBI1 195 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 LPAR3Q9UBY5 353 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 ZNF230Q9UIE0 474 aaPredicted RBP8.86□□□□□ -0.99
TPM1-217ENST00000559108 SESN1Q9Y6P5 492 aa8.86□□□□□ -0.99
TPM1-217ENST00000559108 TRAV18A0A075B6X5 111 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 A0A087X0M5 115 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 TRBV6-6A0A0A6YYG2 114 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 IGHV2-26A0A0B4J1V2 119 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 A0A1B0GX30 115 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 A0A1W2PPE3 182 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 SLC31A2O15432 143 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 HBZP02008 142 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 FCGR3AP08637 254 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 SAA4P35542 130 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 SRP14P37108 136 aaKnown RBP8.85□□□□□ -0.99
TPM1-217ENST00000559108 RORCP51449 518 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 HERPUD1Q15011 391 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 DEFB112Q30KQ8 113 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 CDNFQ49AH0 187 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 UBE2NLQ5JXB2 153 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 C9orf139Q6ZV77 190 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 CROCCP3Q8IVE0 287 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 LAX1Q8IWV1 398 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 OR52L2PQ8NGH6 319 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 KCTD12Q96CX2 325 aaKnown RBP8.85□□□□□ -0.99
TPM1-217ENST00000559108 DCUN1D5Q9BTE7 237 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 TMEM133Q9H2Q1 129 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 TAF9BQ9HBM6 251 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 Q9N2K0 584 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 IDI2-AS1Q9NZ38 188 aa8.85□□□□□ -0.99
TPM1-217ENST00000559108 CCDC59Q9P031 241 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms