RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RAB3GAP2Q9H2M9 1393 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 SPATA31E1Q6ZUB1 1445 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 SSH2Q76I76 1423 aa2.32□□□□□ -2.04
CASC4-206ENST00000558847 IGHV3OR15-7A0A075B7D8 119 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 PSCAO43653 123 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 KLHL2O95198 593 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 SOX14O95416 240 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 EPPINO95925 133 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 ORM1P02763 201 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 FBP1P09467 338 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 PSKH1P11801 424 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 PSMB6P28072 239 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 FOXA1P55317 472 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 ZNHIT3Q15649 155 aaPredicted RBP2.31□□□□□ -2.04
CASC4-206ENST00000558847 PYCR3Q53H96 274 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 TIMM23BQ5SRD1 257 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 SDHAF4Q5VUM1 108 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 ELP2Q6IA86 826 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 ZBTB8OSQ8IWT0 167 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 ZNF664Q8N3J9 261 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 OR52E4Q8NGH9 312 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 OR5L1Q8NGL2 311 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 SPPL2BQ8TCT7 592 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 GALMQ96C23 342 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 NRBP2Q9NSY0 501 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 R4GN34 69 aa2.31□□□□□ -2.04
CASC4-206ENST00000558847 EIF4G1Q04637 1599 aaKnown RBP2.31□□□□□ -2.04
CASC4-206ENST00000558847 TRBV24-1A0A075B6N3 115 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 GOLGA6L10A6NI86 522 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 A8MWP4 228 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 H3BSA7 217 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 DENRO43583 198 aaKnown RBP2.3□□□□□ -2.04
CASC4-206ENST00000558847 IGKV1D-33P01593 117 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 IGKV1-33P01594 117 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 TRGV3P03979 118 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 TPM3P06753 285 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 GABRA1P14867 456 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 RAB2AP61019 212 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 DEFB134Q4QY38 66 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 MARCH3Q86UD3 253 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 KRTCAP2Q8N6L1 136 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 STOML3Q8TAV4 291 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 CHST5Q9GZS9 411 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 OR2D2Q9H210 308 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 FBXL15Q9H469 300 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 UBQLN4Q9NRR5 601 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 ZNF586Q9NXT0 402 aa2.3□□□□□ -2.04
CASC4-206ENST00000558847 MCTS1Q9ULC4 181 aaKnown RBP2.3□□□□□ -2.04
CASC4-206ENST00000558847 PUS1Q9Y606 427 aaKnown RBP eCLIP2.3□□□□□ -2.04
CASC4-206ENST00000558847 NUP153P49790 1475 aaKnown RBP2.3□□□□□ -2.04
CASC4-206ENST00000558847 MIA3Q5JRA6 1907 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 RAD50Q92878 1312 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 IGKV3D-11A0A0A0MRZ8 115 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 A0A0B4J2C4 111 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 C8orf87E5RJ46 101 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 H3BMM0 161 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 GOLGA8RI6L899 631 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 AQP9O43315 295 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 NDUFS6O75380 124 aaKnown RBP2.29□□□□□ -2.04
CASC4-206ENST00000558847 HRES1P13985 223 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 CTSEP14091 401 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 S100A2P29034 98 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 SKP1P63208 163 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 TPM4P67936 248 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 ZNF141Q15928 474 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 HENMT1Q5T8I9 393 aaKnown RBP2.29□□□□□ -2.04
CASC4-206ENST00000558847 BOD1L2Q8IYS8 172 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 EIF4E3Q8N5X7 224 aaKnown RBP2.29□□□□□ -2.04
CASC4-206ENST00000558847 KCTD4Q8WVF5 259 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 UBE2WQ96B02 151 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 C7orf50Q9BRJ6 194 aaKnown RBP2.29□□□□□ -2.04
CASC4-206ENST00000558847 METTL9Q9H1A3 318 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 WDR54Q9H977 334 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 SEC16AO15027 2179 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 THADAQ6YHU6 1953 aa2.29□□□□□ -2.04
CASC4-206ENST00000558847 GGTLC3B5MD39 225 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 FTCDNL1E5RQL4 147 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 F5H5T6 163 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 SMLR1H3BR10 107 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 J3QLI3 93 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 SH2D1AO60880 128 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 CPSF4O95639 269 aaKnown RBP2.28□□□□□ -2.04
CASC4-206ENST00000558847 LTAP01374 205 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 IGKV4-1P06312 121 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 RD3LP0DJH9 198 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 ZNF708P17019 499 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 GADD45AP24522 165 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 AGTR1P30556 359 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 AKR1C2P52895 323 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 HSP90B2PQ58FF3 399 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 CENPWQ5EE01 88 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 OR11L1Q8NGX0 322 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 MAL2Q969L2 176 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 HIST1H2BAQ96A08 127 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 TAMM41Q96BW9 452 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 RBP7Q96R05 134 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
CASC4-206ENST00000558847 HIGD2AQ9BW72 106 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms