RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
LRRC28-206ENST00000558471 RFESDQ8TAC1 157 aa10.16□□□□□ -0.78
LRRC28-206ENST00000558471 MDFIQ99750 246 aa10.16□□□□□ -0.78
LRRC28-206ENST00000558471 FUNDC2Q9BWH2 189 aa10.16□□□□□ -0.78
LRRC28-206ENST00000558471 MRPS26Q9BYN8 205 aaKnown RBP10.16□□□□□ -0.78
LRRC28-206ENST00000558471 LINC00574Q9H8X3 128 aa10.16□□□□□ -0.78
LRRC28-206ENST00000558471 CALYQ9NYX4 217 aa10.16□□□□□ -0.78
LRRC28-206ENST00000558471 IGHV2-26A0A0B4J1V2 119 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 FAM172BPA6NC97 362 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 ODF3BA8MYP8 253 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 C15orf65H3BRN8 121 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 CA11O75493 328 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 IL1AP01583 271 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 TFAP2AP05549 437 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 MELTFP08582 738 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 SSTR5P35346 364 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 LGALS4P56470 323 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 DYNC1I2Q13409 638 aaKnown RBP10.15□□□□□ -0.78
LRRC28-206ENST00000558471 SLC9A3R2Q15599 337 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 LDLRAD2Q5SZI1 272 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 ZNF626Q68DY1 528 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 OR52W1Q6IF63 320 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 SFXN4Q6P4A7 337 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 LHFPL4Q7Z7J7 247 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 ABHD12Q8N2K0 398 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 KIRREL1Q96J84 757 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 CLEC7AQ9BXN2 247 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 PLEKHJ1Q9NW61 149 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 IDI2-AS1Q9NZ38 188 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 DAPK2Q9UIK4 370 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 TRAPPC2LQ9UL33 140 aa10.15□□□□□ -0.78
LRRC28-206ENST00000558471 A0A087X0M5 115 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 A0A1B0GX30 115 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 RNF212BA8MTL3 300 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 TRIM77I1YAP6 450 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 ORC5O43913 435 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 PAHP00439 452 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 FBP1P09467 338 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-206ENST00000558471 RAB6AP20340 208 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 NFYBP25208 207 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 PAX6P26367 422 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 RPS19P39019 145 aaKnown RBP10.14□□□□□ -0.79
LRRC28-206ENST00000558471 IER3P46695 156 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 ALDH3B2P48448 385 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 UBA52P62987 128 aaKnown RBP10.14□□□□□ -0.79
LRRC28-206ENST00000558471 LTC4SQ16873 150 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 MOGAT2Q3SYC2 334 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 PLAC9Q5JTB6 97 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 Q6ZTK2 550 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 LDLRAD3Q86YD5 345 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 OR56B1Q8NGI3 324 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 UBALD1Q8TB05 177 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 MRPL30Q8TCC3 161 aaKnown RBP10.14□□□□□ -0.79
LRRC28-206ENST00000558471 TMEM158Q8WZ71 300 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 ARL11Q969Q4 196 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 PTX4Q96A99 478 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 ARHGAP5-AS1Q96IT6 56 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 ZNF286AQ9HBT8 521 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 ZNRD1Q9P1U0 126 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 HSF4Q9ULV5 492 aa10.14□□□□□ -0.79
LRRC28-206ENST00000558471 C12orf77C9JDV5 145 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 CLDN34H7C241 214 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 RAB27BO00194 218 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 IGHV3-7P01780 117 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 IGHV4-59P01825 116 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 SNRPBP14678 240 aaKnown RBP10.13□□□□□ -0.79
LRRC28-206ENST00000558471 CD34P28906 385 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 NCS1P62166 190 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 IDNKQ5T6J7 187 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 SLC16A12Q6ZSM3 486 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 C5orf24Q7Z6I8 188 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 DYNAPQ8N1N2 210 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-206ENST00000558471 BEND2Q8NDZ0 799 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 OR10A7Q8NGE5 316 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 FAM216AQ8WUB2 273 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 ZFAND2BQ8WV99 257 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 LEAP2Q969E1 77 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 PECRQ9BY49 303 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 NAA50Q9GZZ1 169 aaKnown RBP10.13□□□□□ -0.79
LRRC28-206ENST00000558471 MEGF9Q9H1U4 602 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 MBNL3Q9NUK0 354 aaKnown RBP10.13□□□□□ -0.79
LRRC28-206ENST00000558471 AK3Q9UIJ7 227 aa10.13□□□□□ -0.79
LRRC28-206ENST00000558471 TBL2Q9Y4P3 447 aaKnown RBP10.13□□□□□ -0.79
LRRC28-206ENST00000558471 METTL21EPA6NDL7 271 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 NAPSAO96009 420 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 IGLV1-47P01700 117 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 RNASE1P07998 156 aaKnown RBP10.12□□□□□ -0.79
LRRC28-206ENST00000558471 LOXL3P58215 753 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 VBP1P61758 197 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 FAM189A2Q15884 450 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 SSX2Q16385 188 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 C6orf183Q5T699 404 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 OLFML2AQ68BL7 652 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 FAM53AQ6NSI3 398 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-206ENST00000558471 Q6ZPA2 131 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 ANKRD13BQ86YJ7 626 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 TMEM86BQ8N661 226 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms