RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SSTR5P35346 364 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 ACTG1P63261 375 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 MXD1Q05195 221 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 LTC4SQ16873 150 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 TIMM50Q3ZCQ8 353 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 NR2C2APQ86WQ0 139 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 ABHD12Q8N2K0 398 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 TMEM86BQ8N661 226 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 RFESDQ8TAC1 157 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 KIRREL1Q96J84 757 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 CYYR1Q96J86 154 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 SULT4A1Q9BR01 284 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 CENPOQ9BU64 300 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 DPAGT1Q9H3H5 408 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 LIN7BQ9HAP6 207 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 PLEKHJ1Q9NW61 149 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 IDI2-AS1Q9NZ38 188 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 FBLN5Q9UBX5 448 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 TRAPPC2LQ9UL33 140 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 TBL2Q9Y4P3 447 aaKnown RBP10.04□□□□□ -0.8
SMAD3-205ENST00000558428 POMT1Q9Y6A1 747 aa10.04□□□□□ -0.8
SMAD3-205ENST00000558428 A0A0B4J203 849 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 NPIPB11E5RHQ5 1161 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 LDLRAD4O15165 306 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 SOCS1O15524 211 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 AIREO43918 545 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 IGHV4-59P01825 116 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 SMIM18P0DKX4 95 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 SLC2A2P11168 524 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-205ENST00000558428 PAX6P26367 422 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 SDC2P34741 201 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 IER3P46695 156 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 VEGFCP49767 419 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 PLA2G7Q13093 441 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 C16orf87Q6PH81 154 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 GDPGP1Q6ZNW5 385 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 C6orf201Q7Z4U5 140 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 RTN4RL2Q86UN3 420 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 BEND2Q8NDZ0 799 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 ARL11Q969Q4 196 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 YIPF6Q96EC8 236 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 AJUBAQ96IF1 538 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 FAAP24Q9BTP7 215 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 CHIAQ9BZP6 476 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 LINC00574Q9H8X3 128 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 ZNF286AQ9HBT8 521 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 RAB22AQ9UL26 194 aa10.03□□□□□ -0.8
SMAD3-205ENST00000558428 ORC5O43913 435 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 CLEC2LP0C7M8 214 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 CD34P28906 385 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 C6orf183Q5T699 404 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 MINOS1Q5TGZ0 78 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 GAPTQ8N292 157 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 FAM89BQ8N5H3 189 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 OR10A7Q8NGE5 316 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 OR56B1Q8NGI3 324 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 UBALD1Q8TB05 177 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 ZNF596Q8TC21 504 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 MRPL30Q8TCC3 161 aaKnown RBP10.02□□□□□ -0.81
SMAD3-205ENST00000558428 MALSU1Q96EH3 234 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 SSX3Q99909 188 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 MEGF9Q9H1U4 602 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 DAPK2Q9UIK4 370 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 MINOS1-NBL1R4GNA1 71 aa10.02□□□□□ -0.81
SMAD3-205ENST00000558428 A0A087X0M5 115 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 A0A1B0GX30 115 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 C15orf65H3BRN8 121 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 H3BUX3 64 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 TOR1AO14656 332 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 IGHV3-7P01780 117 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 RCC1P18754 421 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-205ENST00000558428 RAB6AP20340 208 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 HTR1DP28221 377 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 TGFBR1P36897 503 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 EFNB2P52799 333 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 PRRX1P54821 245 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
SMAD3-205ENST00000558428 FAM189A2Q15884 450 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 SSX2Q16385 188 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 LRRC75BQ2VPJ9 315 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 PLA1AQ53H76 456 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 UTF1Q5T230 341 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 SFXN4Q6P4A7 337 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 TRAT1Q6PIZ9 186 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 Q6ZTK2 550 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 DYNAPQ8N1N2 210 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 OR5R1Q8NH85 324 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 GCDHQ92947 438 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-205ENST00000558428 LEAP2Q969E1 77 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 ARHGAP5-AS1Q96IT6 56 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 MRPS26Q9BYN8 205 aaKnown RBP10.01□□□□□ -0.81
SMAD3-205ENST00000558428 CHMP1AQ9HD42 196 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-205ENST00000558428 RAB9BQ9NP90 201 aa10.01□□□□□ -0.81
SMAD3-205ENST00000558428 HILPDAQ9Y5L2 63 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms