RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 GLP1RP43220 463 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 RAG2P55895 527 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 RPS25P62851 125 aaKnown RBP6.87□□□□□ -1.31
TPM1-213ENST00000558400 INSL4Q14641 139 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 C17orf58Q2M2W7 97 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 TMEM30BQ3MIR4 351 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 Q3ZCU0 254 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 FAM27D1Q5T7N8 215 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 DHRS7BQ6IAN0 325 aaPredicted RBP6.87□□□□□ -1.31
TPM1-213ENST00000558400 RAB12Q6IQ22 244 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 CCDC144NLQ6NUI1 221 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 CD200R1LQ6Q8B3 271 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 ZNF497Q6ZNH5 498 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 OR2W3Q7Z3T1 314 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 ZNF554Q86TJ5 538 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 SPARTQ8N0X7 666 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 OR9G1Q8NH87 305 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 SGMS2Q8NHU3 365 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 PLPPR1Q8TBJ4 325 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 Q96M66 194 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 NKX3-1Q99801 234 aaPredicted RBP6.87□□□□□ -1.31
TPM1-213ENST00000558400 URM1Q9BTM9 101 aaKnown RBP6.87□□□□□ -1.31
TPM1-213ENST00000558400 PPIL3Q9H2H8 161 aaKnown RBP6.87□□□□□ -1.31
TPM1-213ENST00000558400 BANF2Q9H503 90 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 C16orf95Q9H693 158 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 PLGRKTQ9HBL7 147 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 ETAA1Q9NY74 926 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 CALYQ9NYX4 217 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 IDI2-AS1Q9NZ38 188 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 AMMECR1Q9Y4X0 333 aaPredicted RBP6.87□□□□□ -1.31
TPM1-213ENST00000558400 V9GY05 133 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 A0A1W2PP11 408 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 AIPO00170 330 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 SPINT2O43291 252 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 PDCD6O75340 191 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 MMP23AO75900 390 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 MPIG6BO95866 241 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 IGLV1-47P01700 117 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 OMGP23515 440 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 NFYBP25208 207 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 CALRP27797 417 aaKnown RBP6.86□□□□□ -1.31
TPM1-213ENST00000558400 MNDAP41218 407 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 SMCPP49901 116 aaPredicted RBP6.86□□□□□ -1.31
TPM1-213ENST00000558400 RPS27AP62979 156 aaKnown RBP6.86□□□□□ -1.31
TPM1-213ENST00000558400 FABP5Q01469 135 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 C6orf183Q5T699 404 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 SYT6Q5T7P8 510 aaPredicted RBP6.86□□□□□ -1.31
TPM1-213ENST00000558400 PRAMEF5Q5TYX0 476 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 STEAP3Q658P3 488 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 OLFML2AQ68BL7 652 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 C11orf88Q6PI97 169 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 LHFPL4Q7Z7J7 247 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 GAPTQ8N292 157 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 TMEM104Q8NE00 496 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 OR4P4Q8NGL7 312 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 OR13A1Q8NGR1 328 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 MRGPRDQ8TDS7 321 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 C17orf50Q8WW18 174 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 ARL11Q969Q4 196 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 KIRREL1Q96J84 757 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 TM2D1Q9BX74 207 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 TMEM59Q9BXS4 323 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 RIMS4Q9H426 269 aaPredicted RBP6.86□□□□□ -1.31
TPM1-213ENST00000558400 NDUFB11Q9NX14 153 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 KCNIP1Q9NZI2 227 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 TRAPPC2LQ9UL33 140 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 AK6Q9Y3D8 172 aaKnown RBP6.86□□□□□ -1.31
TPM1-213ENST00000558400 HILPDAQ9Y5L2 63 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 KIAA2026Q5HYC2 2103 aa6.86□□□□□ -1.31
TPM1-213ENST00000558400 TMEM14DPA8MWL7 114 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 BUB1B-PAK6H3BSN5 160 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 J3QR06 171 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 MDKP21741 143 aaPredicted RBP6.85□□□□□ -1.31
TPM1-213ENST00000558400 MYL9P24844 172 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 PSMB9P28065 219 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 FGF9P31371 208 aaPredicted RBP6.85□□□□□ -1.31
TPM1-213ENST00000558400 KIR2DS4P43632 304 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 QRFPP83859 136 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 RAB11BQ15907 218 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 SSX1Q16384 188 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 HLA-DRB5Q30154 266 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 KCTD21Q4G0X4 260 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 PDLIM3Q53GG5 364 aaPredicted RBP6.85□□□□□ -1.31
TPM1-213ENST00000558400 ZNF773Q6PK81 442 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 TPRA1Q86W33 373 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 FAM89BQ8N5H3 189 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 C8orf31Q8N9H6 132 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 RFESDQ8TAC1 157 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 FAM46BQ96A09 425 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 AKR1E2Q96JD6 320 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 NPFFR1Q9GZQ6 430 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 MMP28Q9H239 520 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 RANBP3Q9H6Z4 567 aaPredicted RBP6.85□□□□□ -1.31
TPM1-213ENST00000558400 PLEKHJ1Q9NW61 149 aa6.85□□□□□ -1.31
TPM1-213ENST00000558400 FBLN5Q9UBX5 448 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms