RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TM2D1Q9BX74 207 aa13.5□□□□□ -0.25
NEK9-211ENST00000557673 METTL8Q9H825 291 aaKnown RBP13.5□□□□□ -0.25
NEK9-211ENST00000557673 LIN7BQ9HAP6 207 aa13.5□□□□□ -0.25
NEK9-211ENST00000557673 TET2Q6N021 2002 aaPredicted RBP13.49□□□□□ -0.25
NEK9-211ENST00000557673 A0A0B4J203 849 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 G3V4G9 280 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 SLC2A2P11168 524 aaPredicted RBP13.49□□□□□ -0.25
NEK9-211ENST00000557673 ERP29P30040 261 aaKnown RBP13.49□□□□□ -0.25
NEK9-211ENST00000557673 SAA4P35542 130 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 KCNJ3P48549 501 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 NCS1P62166 190 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 PAX5Q02548 391 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 ZNF273Q14593 569 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 SIGIRRQ6IA17 410 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 ANKRD13BQ86YJ7 626 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 TPRX1Q8N7U7 411 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 SUMF2Q8NBJ7 301 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 DPCDQ9BVM2 203 aaPredicted RBP13.49□□□□□ -0.25
NEK9-211ENST00000557673 NAA50Q9GZZ1 169 aaKnown RBP13.49□□□□□ -0.25
NEK9-211ENST00000557673 SPACA1Q9HBV2 294 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 RAB18Q9NP72 206 aa13.49□□□□□ -0.25
NEK9-211ENST00000557673 A0A0A6YYD4 124 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 TMEM272A0A1B0GTI8 110 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 MEF2CQ06413 473 aaPredicted RBP13.48□□□□□ -0.25
NEK9-211ENST00000557673 TMEM200BQ69YZ2 307 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 HCP5Q6MZN7 132 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 BEND2Q8NDZ0 799 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 OR4C13Q8NGP0 309 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 PLPPR1Q8TBJ4 325 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 NICN1Q9BSH3 213 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 LPAR5Q9H1C0 372 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 SCOCQ9UIL1 159 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 LINC00312Q9Y6C7 94 aa13.48□□□□□ -0.25
NEK9-211ENST00000557673 PDCD6O75340 191 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 CCL3L1P16619 93 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 KIR2DS4P43632 304 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 RPL5P46777 297 aaKnown RBP13.47□□□□□ -0.25
NEK9-211ENST00000557673 GLIPR1P48060 266 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 DLX6P56179 175 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 AESQ08117 197 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 PLA2G7Q13093 441 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 FAM189A2Q15884 450 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 CTF1Q16619 201 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 KRBOX4Q5JUW0 171 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 ATAD3CQ5T2N8 411 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 SAMD5Q5TGI4 173 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 GPR107Q5VW38 600 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 RSBN1Q5VWQ0 802 aaPredicted RBP13.47□□□□□ -0.25
NEK9-211ENST00000557673 RAB12Q6IQ22 244 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 OR2T6Q8NHC8 308 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 CYYR1Q96J86 154 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 DAPK2Q9UIK4 370 aa13.47□□□□□ -0.25
NEK9-211ENST00000557673 A0A1W2PPH5 198 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 hADV38S2A0JD32 116 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 ODAMA1E959 279 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 MEX3AA1L020 520 aaKnown RBP13.46□□□□□ -0.25
NEK9-211ENST00000557673 FUOMA2VDF0 154 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 IL1AP01583 271 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 CHATP28329 748 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 VBP1P61758 197 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 C2orf76Q3KRA6 126 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 Q6ZPA2 131 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 C11orf42Q8N5U0 333 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 LGALS14Q8TCE9 139 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 C17orf50Q8WW18 174 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
NEK9-211ENST00000557673 RANBP3Q9H6Z4 567 aaPredicted RBP13.46□□□□□ -0.25
NEK9-211ENST00000557673 KIF25Q9UIL4 384 aa13.46□□□□□ -0.25
NEK9-211ENST00000557673 FOXI3A8MTJ6 420 aaPredicted RBP13.45□□□□□ -0.26
NEK9-211ENST00000557673 H3BUI4 141 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 H3BUX3 64 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 RBP4P02753 201 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 RAB6AP20340 208 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 FUT3P21217 361 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 SERPINB10P48595 397 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 EFNB2P52799 333 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 ERVFRD-1P60508 538 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 AANATQ16613 207 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 RTN4RL2Q86UN3 420 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 FAM89BQ8N5H3 189 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 NEK7Q8TDX7 302 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 CFHR4Q92496 578 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 ZNF714Q96N38 554 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 SSX3Q99909 188 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 ING3Q9NXR8 418 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 PEX16Q9Y5Y5 336 aa13.45□□□□□ -0.26
NEK9-211ENST00000557673 TRGV10A0A0A0MS01 117 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 TMEM30CPA0ZSE6 113 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 MCRIP1C9JLW8 97 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 GLAP06280 429 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 ZNF728P0DKX0 622 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 SNRPBP14678 240 aaKnown RBP13.44□□□□□ -0.26
NEK9-211ENST00000557673 COX7A1P24310 79 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 RPS19P39019 145 aaKnown RBP13.44□□□□□ -0.26
NEK9-211ENST00000557673 GLP1RP43220 463 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 SCAND1P57086 179 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 NKAPLQ5M9Q1 402 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 ZNF782Q6ZMW2 699 aaPredicted RBP13.44□□□□□ -0.26
NEK9-211ENST00000557673 ZNF497Q6ZNH5 498 aa13.44□□□□□ -0.26
NEK9-211ENST00000557673 LIAT1Q6ZQX7 453 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms