RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 AIPO00170 330 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 MT-ND4P03905 459 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 NFYBP25208 207 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 HTR1DP28221 377 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 ARHGDIBP52566 201 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 SSX2Q16385 188 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 TRAT1Q6PIZ9 186 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 SLC16A12Q6ZSM3 486 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 C3orf56Q8N813 242 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 KIRREL1Q96J84 757 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 NEDD4LQ96PU5 975 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 GFI1Q99684 422 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 RAB18Q9NP72 206 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 ABCB10Q9NRK6 738 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 TRAPPC2LQ9UL33 140 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 SSR3Q9UNL2 185 aa10.12□□□□□ -0.79
SLIRP-209ENST00000557342 POM121CA8CG34 1229 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 VGLL3A8MV65 326 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 LEUTXA8MZ59 168 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 ORC5O43913 435 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 NDUFA7O95182 113 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 RAB3BP20337 219 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 FGF9P31371 208 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-209ENST00000557342 GDNFP39905 211 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 CEACAM3P40198 252 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 QRFPP83859 136 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 UNC119Q13432 240 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 P2RY14Q15391 338 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 FAM189A2Q15884 450 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 C6orf183Q5T699 404 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 SYT6Q5T7P8 510 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-209ENST00000557342 SIGIRRQ6IA17 410 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 DHRS7BQ6IAN0 325 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-209ENST00000557342 C22orf42Q6IC83 251 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 OR10K2Q6IF99 312 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 BAIAP2L2Q6UXY1 529 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 OR4P4Q8NGL7 312 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 OR9G1Q8NH87 305 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 CCDC107Q8WV48 283 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 BEX1Q9HBH7 125 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 ZNF286AQ9HBT8 521 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 VCX3AQ9NNX9 186 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 C1RLQ9NZP8 487 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 DPM3Q9P2X0 92 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 STEAP1Q9UHE8 339 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 AMMECR1Q9Y4X0 333 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-209ENST00000557342 MMP24Q9Y5R2 645 aa10.11□□□□□ -0.79
SLIRP-209ENST00000557342 TRAV39A0A0B4J263 110 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 UBE2QL1A1L167 161 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 FAM172BPA6NC97 362 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 IGLV1-47P01700 117 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 CHATP28329 748 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 SSTR5P35346 364 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 DYNLT3P51808 116 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 RAG2P55895 527 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 NEDD8Q15843 81 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 HLA-DRB5Q30154 266 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 TMEM30BQ3MIR4 351 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 NKAPLQ5M9Q1 402 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 GAPTQ8N292 157 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 OR51D1Q8NGF3 324 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 OR52M1Q8NGK5 317 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 RFESDQ8TAC1 157 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 ARL11Q969Q4 196 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 FAM3DQ96BQ1 224 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 TXNL4BQ9NX01 149 aaKnown RBP10.1□□□□□ -0.79
SLIRP-209ENST00000557342 FBLN5Q9UBX5 448 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 PITPNC1Q9UKF7 332 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 HILPDAQ9Y5L2 63 aa10.1□□□□□ -0.79
SLIRP-209ENST00000557342 IFITM5A6NNB3 132 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 OOSP1A8MZH6 123 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 C15orf65H3BRN8 121 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 BUB1B-PAK6H3BSN5 160 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 J3QR06 171 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 HAX1O00165 279 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 SDCBPO00560 298 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-209ENST00000557342 SPINT2O43291 252 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 PAX6P26367 422 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 CFPP27918 469 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 BLVRBP30043 206 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-209ENST00000557342 LY6EQ16553 131 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 LTC4SQ16873 150 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 C2orf76Q3KRA6 126 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 PLA1AQ53H76 456 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 LDLRAD2Q5SZI1 272 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 HES5Q5TA89 166 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 CCDC144NLQ6NUI1 221 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 ZNF554Q86TJ5 538 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 TPRA1Q86W33 373 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 DYNAPQ8N1N2 210 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 FAM89BQ8N5H3 189 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 DTX3Q8N9I9 347 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 OR4K15Q8NH41 348 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 LPAR5Q9H1C0 372 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 MMP28Q9H239 520 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 KCNK15Q9H427 330 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 PLEKHJ1Q9NW61 149 aa10.09□□□□□ -0.79
SLIRP-209ENST00000557342 KCNIP1Q9NZI2 227 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms