RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 UBE2QL1A1L167 161 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 AIPO00170 330 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 TOR1AO14656 332 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 IL1AP01583 271 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 IGLV1-47P01700 117 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 NFYBP25208 207 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 HTR1DP28221 377 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 GDNFP39905 211 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 P2RY14Q15391 338 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 NEDD8Q15843 81 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 LRRC75BQ2VPJ9 315 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 TRAT1Q6PIZ9 186 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 BAIAP2L2Q6UXY1 529 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 GDPGP1Q6ZNW5 385 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 TPRA1Q86W33 373 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 FAM89BQ8N5H3 189 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 TSPAN14Q8NG11 270 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 OR51D1Q8NGF3 324 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 CCDC107Q8WV48 283 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 FAM3DQ96BQ1 224 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 KIRREL1Q96J84 757 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 LPAR5Q9H1C0 372 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 VPREB3Q9UKI3 123 aa8.66□□□□□ -1.02
LINC00239-201ENST00000556973 TRAV39A0A0B4J263 110 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 SHISA3A0PJX4 238 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 IFITM5A6NNB3 132 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 VGLL3A8MV65 326 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 LEUTXA8MZ59 168 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 C15orf65H3BRN8 121 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 H3BUX3 64 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 GPR137BO60478 399 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 CD36P16671 472 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 CFPP27918 469 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 CHATP28329 748 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 BLVRBP30043 206 aaPredicted RBP8.65□□□□□ -1.02
LINC00239-201ENST00000556973 CEACAM3P40198 252 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 FAM189A2Q15884 450 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 SSX2Q16385 188 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 LDLRAD2Q5SZI1 272 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 HES5Q5TA89 166 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 OR52M1Q8NGK5 317 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 OR9G1Q8NH87 305 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 RFESDQ8TAC1 157 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 ARL11Q969Q4 196 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 FAAP24Q9BTP7 215 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 ZNF286AQ9HBT8 521 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 VCX3AQ9NNX9 186 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 RAB9BQ9NP90 201 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 PLEKHJ1Q9NW61 149 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 C1RLQ9NZP8 487 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 DPM3Q9P2X0 92 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 RAB22AQ9UL26 194 aa8.65□□□□□ -1.02
LINC00239-201ENST00000556973 BUB1B-PAK6H3BSN5 160 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 J3QR06 171 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 SOCS1O15524 211 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 NDUFA7O95182 113 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 PAX6P26367 422 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 SSTR5P35346 364 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 DYNLT3P51808 116 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 CLDN12P56749 244 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 OR10A3P58181 314 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 LTC4SQ16873 150 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 HLA-DRB5Q30154 266 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 AWAT1Q58HT5 328 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 NKAPLQ5M9Q1 402 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 C6orf183Q5T699 404 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 C6orf201Q7Z4U5 140 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 ZNF554Q86TJ5 538 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 DYNAPQ8N1N2 210 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 OR4P4Q8NGL7 312 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 OR4K15Q8NH41 348 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 NDNFQ8TB73 568 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 PIFOQ8TCI5 191 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 KCTD7Q96MP8 289 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 SULT4A1Q9BR01 284 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 NICN1Q9BSH3 213 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 OR51E2Q9H255 320 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 KCNK15Q9H427 330 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 ZNF696Q9H7X3 374 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 LIN7BQ9HAP6 207 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 MBNL3Q9NUK0 354 aaKnown RBP8.64□□□□□ -1.03
LINC00239-201ENST00000556973 KCNIP1Q9NZI2 227 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 HSF4Q9ULV5 492 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 HILPDAQ9Y5L2 63 aa8.64□□□□□ -1.03
LINC00239-201ENST00000556973 A0A0A6YYD4 124 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 A0A1B0GUS0 222 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 FAM172BPA6NC97 362 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 POM121CA8CG34 1229 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 NOTOA8MTQ0 251 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 LY6LH3BQJ8 138 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 F2RL2O00254 374 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 SDCBPO00560 298 aaPredicted RBP8.63□□□□□ -1.03
LINC00239-201ENST00000556973 LDLRAD4O15165 306 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 SPINT2O43291 252 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 JUNBP17275 347 aaPredicted RBP8.63□□□□□ -1.03
LINC00239-201ENST00000556973 RCC1P18754 421 aaPredicted RBP8.63□□□□□ -1.03
LINC00239-201ENST00000556973 RAB6AP20340 208 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 GADD45AP24522 165 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 VEGFCP49767 419 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms