RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 OR4K15Q8NH41 348 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 ZNF596Q8TC21 504 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 MRPS24Q96EL2 167 aaKnown RBP8.35□□□□□ -1.07
SNX6-208ENST00000556712 C16orf95Q9H693 158 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 PCDHB16Q9NRJ7 776 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 ETAA1Q9NY74 926 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 AK6Q9Y3D8 172 aaKnown RBP8.35□□□□□ -1.07
SNX6-208ENST00000556712 PEX16Q9Y5Y5 336 aa8.35□□□□□ -1.07
SNX6-208ENST00000556712 A6NDX4 124 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 MCRIP1C9JLW8 97 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 NPIPB11E5RHQ5 1161 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 C15orf65H3BRN8 121 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 BUB1B-PAK6H3BSN5 160 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 SLC22A1O15245 554 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 DENRO43583 198 aaKnown RBP8.34□□□□□ -1.07
SNX6-208ENST00000556712 TSPAN9O75954 239 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 HTR2CP28335 458 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 CLDN12P56749 244 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 DIAPH2-AS1Q14236 149 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 HABP2Q14520 560 aaPredicted RBP8.34□□□□□ -1.07
SNX6-208ENST00000556712 TRAM1Q15629 374 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 TPTE2P1Q5T6R2 138 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 C5orf24Q7Z6I8 188 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 OR6M1Q8NGM8 313 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 OR4C13Q8NGP0 309 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 OR9G1Q8NH87 305 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 ARL11Q969Q4 196 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 TMEM59Q9BXS4 323 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 CST11Q9H112 138 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 MMP28Q9H239 520 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 NCOR1P1Q9H4R4 102 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 Q9H521 79 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 PLGRKTQ9HBL7 147 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 DPM3Q9P2X0 92 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 CMYA5Q8N3K9 4069 aa8.34□□□□□ -1.07
SNX6-208ENST00000556712 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 A0A0A6YYD4 124 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 SHISA3A0PJX4 238 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 LEUTXA8MZ59 168 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 C12orf77C9JDV5 145 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 J3QR06 171 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 SDCBPO00560 298 aaPredicted RBP8.33□□□□□ -1.08
SNX6-208ENST00000556712 PDCD6O75340 191 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 ARL6IP5O75915 188 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 MT-ND4P03905 459 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 UBBP0CG47 229 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 PSMA1P25786 263 aaKnown RBP8.33□□□□□ -1.08
SNX6-208ENST00000556712 PSMB9P28065 219 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 OR10A3P58181 314 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 RPS27AP62979 156 aaKnown RBP8.33□□□□□ -1.08
SNX6-208ENST00000556712 QRFPP83859 136 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 TMEM95Q3KNT9 176 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 SYT6Q5T7P8 510 aaPredicted RBP8.33□□□□□ -1.08
SNX6-208ENST00000556712 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 C6orf201Q7Z4U5 140 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 SPARTQ8N0X7 666 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 PRR18Q8N4B5 295 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 OR1L1Q8NH94 360 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 SGMS2Q8NHU3 365 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 TOMM40LQ969M1 308 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 CITED1Q99966 193 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 SULT4A1Q9BR01 284 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 NPFFR1Q9GZQ6 430 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 LINC00574Q9H8X3 128 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 ZNF702PQ9H963 129 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 SPACA1Q9HBV2 294 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 RAB18Q9NP72 206 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 NDUFB11Q9NX14 153 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 GHRLQ9UBU3 117 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 TRAPPC2LQ9UL33 140 aa8.33□□□□□ -1.08
SNX6-208ENST00000556712 A0A1W2PPI3 338 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A10PA6NDY2 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A18PA6NE21 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A16PA6NEW6 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A20PA6NIJ5 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A7PA6NKC0 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A22PA8MWA6 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 TMEM14DPA8MWL7 114 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A12PA8MX19 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A5PA8MXJ8 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A23PA8MXZ1 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 LY6LH3BQJ8 138 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 SLC17A2O00624 439 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 SLC31A2O15432 143 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 BPNT1O95861 308 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A15PP0C7V4 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A13PP0C7W8 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A14PP0C7W9 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 FAM90A24PP0C7X0 464 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 RCC1P18754 421 aaPredicted RBP8.32□□□□□ -1.08
SNX6-208ENST00000556712 FUT3P21217 361 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 CHATP28329 748 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 DYNLT3P51808 116 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 EFNB2P52799 333 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 PRRX1P54821 245 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 PLA2G7Q13093 441 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 RAB11BQ15907 218 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 HES5Q5TA89 166 aa8.32□□□□□ -1.08
SNX6-208ENST00000556712 UBE2UQ5VVX9 321 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms